RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 NECTIN4Q96NY8 510 aa22.8■■□□□ 1.24
RER1-201ENST00000306256 GAD1Q99259 594 aa22.8■■□□□ 1.24
RER1-201ENST00000306256 TMEM175Q9BSA9 504 aa22.8■■□□□ 1.24
RER1-201ENST00000306256 POLR3FQ9H1D9 316 aaPredicted RBP22.8■■□□□ 1.24
RER1-201ENST00000306256 KCNH6Q9H252 994 aa22.8■■□□□ 1.24
RER1-201ENST00000306256 PRG3Q9Y2Y8 225 aaPredicted RBP22.8■■□□□ 1.24
RER1-201ENST00000306256 NRP1O14786 923 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 USO1O60763 962 aaKnown RBP22.79■■□□□ 1.24
RER1-201ENST00000306256 GLRA2P23416 452 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 AXLP30530 894 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 MCM7P33993 719 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 MLH1P40692 756 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 MTHFRP42898 656 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 AMHR2Q16671 573 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 IFNLR1Q8IU57 520 aaPredicted RBP22.79■■□□□ 1.24
RER1-201ENST00000306256 SUGP1Q8IWZ8 645 aaKnown RBP22.79■■□□□ 1.24
RER1-201ENST00000306256 CNNM3Q8NE01 707 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 ASIC4Q96FT7 647 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 RIPOR3Q96MK2 946 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 ZFP42Q96MM3 310 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 CSRNP2Q9H175 543 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 MARCH5Q9NX47 278 aa22.79■■□□□ 1.24
RER1-201ENST00000306256 WDFY4Q6ZS81 3184 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 ARL5CA6NH57 179 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 B4GALT5O43286 388 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 ALDH2P05091 517 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 ARF4P18085 180 aaPredicted RBP22.78■■□□□ 1.24
RER1-201ENST00000306256 IER5LQ5T953 404 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 KIAA1841Q6NSI8 718 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 TMC5Q6UXY8 1006 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 MAEAQ7L5Y9 396 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 CABP7Q86V35 215 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 CDR2LQ86X02 465 aaPredicted RBP22.78■■□□□ 1.24
RER1-201ENST00000306256 FBXL6Q8N531 539 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 CCDC51Q96ER9 411 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 KLHL5Q96PQ7 755 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 NXF3Q9H4D5 531 aaKnown RBP22.78■■□□□ 1.24
RER1-201ENST00000306256 GPRC5CQ9NQ84 441 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 MIOSQ9NXC5 875 aa22.78■■□□□ 1.24
RER1-201ENST00000306256 MTCL1Q9Y4B5 1905 aaKnown RBP22.78■■□□□ 1.24
RER1-201ENST00000306256 C2CD2LO14523 706 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 CNPP09543 421 aaKnown RBP22.77■■□□□ 1.24
RER1-201ENST00000306256 SPATA31C1P0DKV0 1188 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 KLRC2P26717 231 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 OR1G1P47890 313 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 SCNN1GP51170 649 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 POU5F1BQ06416 359 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 PCBP1Q15365 356 aaKnown RBP eCLIP22.77■■□□□ 1.243e-6■■■■■ 45.3
RER1-201ENST00000306256 CCDC83Q8IWF9 413 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 COLGALT2Q8IYK4 626 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 KREMEN2Q8NCW0 462 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 EMILIN2Q9BXX0 1053 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 UBN1Q9NPG3 1134 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 DBR1Q9UK59 544 aaKnown RBP22.77■■□□□ 1.24
RER1-201ENST00000306256 TRIP11Q15643 1979 aa22.77■■□□□ 1.24
RER1-201ENST00000306256 SPDYE4A6NLX3 237 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 F8W810 466 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 INPPL1O15357 1258 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 NCBP1Q09161 790 aaKnown RBP22.76■■□□□ 1.23
RER1-201ENST00000306256 ATAT1Q5SQI0 421 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 ERICH6BQ5W0A0 696 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 TAS1R1Q7RTX1 841 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 PPFIBP1Q86W92 1011 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 PRSS33Q8NF86 280 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 TRIM6Q9C030 488 aaPredicted RBP22.76■■□□□ 1.23
RER1-201ENST00000306256 SMOC2Q9H3U7 446 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 MRPL17Q9NRX2 175 aaKnown RBP22.76■■□□□ 1.23
RER1-201ENST00000306256 CACNA1HO95180 2353 aa22.76■■□□□ 1.23
RER1-201ENST00000306256 LRRIQ4A6NIV6 560 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 LILRB3O75022 631 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 MED24O75448 989 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 NPTXRO95502 500 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 SOD2P04179 222 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 URODP06132 367 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 CLCN4P51793 760 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 VCPP55072 806 aaKnown RBP22.75■■□□□ 1.23
RER1-201ENST00000306256 DSC1Q08554 894 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 SAFBQ15424 915 aaKnown RBP eCLIP22.75■■□□□ 1.232e-6■■■■□ 19.6
RER1-201ENST00000306256 CATSPER3Q86XQ3 398 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 TDRD5Q8NAT2 981 aaKnown RBP22.75■■□□□ 1.23
RER1-201ENST00000306256 C8orf76Q96K31 380 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 HERC2P3Q9BVR0 1158 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 NFKBIZQ9BYH8 718 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 SFXN1Q9H9B4 322 aa22.75■■□□□ 1.23
RER1-201ENST00000306256 DOCK6Q96HP0 2047 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 DOCK8Q8NF50 2099 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 BRD1O95696 1058 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 PDGFBP01127 241 aaPredicted RBP22.74■■□□□ 1.23
RER1-201ENST00000306256 ASGR2P07307 311 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 AKAP5P24588 427 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 MRE11P49959 708 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 ZNF174Q15697 407 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 POTEGQ6S5H5 508 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 STK39Q9UEW8 545 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 LIMCH1Q9UPQ0 1083 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 SORCS3Q9UPU3 1222 aa22.74■■□□□ 1.23
RER1-201ENST00000306256 EIF5BO60841 1220 aaKnown RBP22.73■■□□□ 1.23
RER1-201ENST00000306256 XRCC6P12956 609 aaKnown RBP eCLIP22.73■■□□□ 1.23
RER1-201ENST00000306256 TUFT1Q9NNX1 390 aa22.73■■□□□ 1.23
RER1-201ENST00000306256 KLK14Q9P0G3 267 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms