RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 DDHD1Q8NEL9 900 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 DCUN1D1Q96GG9 259 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 SERPINB4P48594 390 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 KLHL17Q6TDP4 642 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 CNDP1Q96KN2 507 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 MSTO1Q9BUK6 570 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 GOLPH3LQ9H4A5 285 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 CAV1Q03135 178 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 NME3Q13232 169 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 KCTD2Q14681 263 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 CUEDC2Q9H467 287 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 CHMP2BQ9UQN3 213 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 ROR1Q01973 937 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 CABLES1Q8TDN4 633 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 CALML6Q8TD86 181 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRIM56-201ENST00000306085 GTF2IP78347 998 aa14.15□□□□□ -0.15
TRIM56-201ENST00000306085 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.15
TRIM56-201ENST00000306085 NUP85Q9BW27 656 aa14.15□□□□□ -0.15
TRIM56-201ENST00000306085 EIF2AK4Q9P2K8 1649 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 SCFD1Q8WVM8 642 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 DPCR1Q3MIW9 517 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 NAALADL2Q58DX5 795 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 TNIP2Q8NFZ5 429 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 DYRK4Q9NR20 520 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 NCOA1Q15788 1441 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 MAP3K1Q13233 1512 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 TYK2P29597 1187 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 PARP10Q53GL7 1025 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 TTC33Q6PID6 262 aaPredicted RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 TAF8Q7Z7C8 310 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 RBM41Q96IZ5 413 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 OLFM1Q99784 485 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 A0A087WWV3 80 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 ZNF197O14709 1029 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 STX3Q13277 289 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 FANCBQ8NB91 859 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 ZNF496Q96IT1 587 aaPredicted RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 BTBD18B2RXH4 712 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 SYNCRIPO60506 623 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 PDE5AO76074 875 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 GPR1P46091 355 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 DAB2IPQ5VWQ8 1189 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 HEATR6Q6AI08 1181 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 KRT74Q7RTS7 529 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 SNX31Q8N9S9 440 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 POLR3EQ9NVU0 708 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 EFCAB5A4FU69 1503 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 DPYSL4O14531 572 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 FYNP06241 537 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 MYBL1P10243 752 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 PDIA2Q13087 525 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 RMDN1Q96DB5 314 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 TMEM206Q9H813 350 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 AP3B1O00203 1094 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 CDC40O60508 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 KRT16P08779 473 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 ABCB5Q2M3G0 1257 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 PLBD2Q8NHP8 589 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 DCPSQ96C86 337 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 REXO4Q9GZR2 422 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 FAM45BPQ6NSW5 357 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 C16orf89Q6UX73 402 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 THEM5Q8N1Q8 247 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 EXD1Q8NHP7 514 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 MARCOQ9UEW3 520 aaPredicted RBP14.14□□□□□ -0.15
TRIM56-201ENST00000306085 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
TRIM56-201ENST00000306085 HSMCR30P0CW71 290 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 HSPA2P54652 639 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 ZNF274Q96GC6 653 aaPredicted RBP14.13□□□□□ -0.15
TRIM56-201ENST00000306085 RWDD2AQ9UIY3 292 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 CFAP99D6REC4 459 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 CAND2O75155 1236 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 CUL4AQ13619 759 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 DENND6AQ8IWF6 608 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 STK32BQ9NY57 414 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 ABCD1P33897 745 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 RPS7P62081 194 aaKnown RBP14.13□□□□□ -0.15
TRIM56-201ENST00000306085 MTERF2Q49AM1 385 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
TRIM56-201ENST00000306085 RSBN1Q5VWQ0 802 aaPredicted RBP14.13□□□□□ -0.15
TRIM56-201ENST00000306085 FRMD6Q96NE9 622 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 SERHL2Q9H4I8 314 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 SERHLQ9NQF3 203 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 EIF4A2Q14240 407 aaKnown RBP14.13□□□□□ -0.15
TRIM56-201ENST00000306085 LAD1O00515 517 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 CSNK2BP67870 215 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 FKBP3Q00688 224 aaKnown RBP14.13□□□□□ -0.15
TRIM56-201ENST00000306085 NCF4Q15080 339 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 RAD21L1Q9H4I0 556 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 KLHL20Q9Y2M5 609 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 IPPQ9Y573 584 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 EEPD1Q7L9B9 569 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 CCDC134Q9H6E4 229 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 HPS5Q9UPZ3 1129 aa14.13□□□□□ -0.15
TRIM56-201ENST00000306085 IQCA1LA6NCM1 817 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms