RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 WNT8AQ9H1J5 351 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 HOMER2Q9NSB8 354 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 MYH2Q9UKX2 1941 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 FAM47DPA6NHR8 397 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 KCNA3P22001 575 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 ECHS1P30084 290 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 FMO5P49326 533 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 BBOF1Q8ND07 529 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 ZNF570Q96NI8 536 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 VCX3BQ9H321 246 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 VCX3AQ9NNX9 186 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 ADAM22Q9P0K1 906 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 BTNL10A8MVZ5 291 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 DDX39AO00148 427 aaKnown RBP13.93□□□□□ -0.18
TRIM35-201ENST00000305364 CALB2P22676 271 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 MAN1A1P33908 653 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 FITM2Q8N6M3 262 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 KRT35Q92764 455 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 GPR101Q96P66 508 aaPredicted RBP13.93□□□□□ -0.18
TRIM35-201ENST00000305364 MTMR9Q96QG7 549 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 FAM118BQ9BPY3 351 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 ARFGEF2Q9Y6D5 1785 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 LOC102724428A0A0B4J2F2 783 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 EME2A4GXA9 379 aaPredicted RBP13.93□□□□□ -0.18
TRIM35-201ENST00000305364 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 FOXO6A8MYZ6 492 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 RSPH10B2B2RC85 870 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 GGPS1O95749 300 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 RSPH10BP0C881 870 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 GCLMP48507 274 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 SIK1P57059 783 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 CUL3Q13618 768 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 SPDYCQ5MJ68 293 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
TRIM35-201ENST00000305364 DYDC2Q96IM9 177 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 BTBD6Q96KE9 485 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 RNPEPL1Q9HAU8 725 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 PARVGQ9HBI0 331 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 NPHS2Q9NP85 383 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 UBN1Q9NPG3 1134 aa13.93□□□□□ -0.18
TRIM35-201ENST00000305364 LARSQ9P2J5 1176 aaKnown RBP13.93□□□□□ -0.18
TRIM35-201ENST00000305364 TTC7AQ9ULT0 858 aaPredicted RBP13.93□□□□□ -0.18
TRIM35-201ENST00000305364 PLS3P13797 630 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 ITGA8P53708 1063 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 TRAF1Q13077 416 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 TTBK2Q6IQ55 1244 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 SLC13A5Q86YT5 568 aaPredicted RBP13.92□□□□□ -0.18
TRIM35-201ENST00000305364 APEX2Q9UBZ4 518 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 ANAPC7Q9UJX3 599 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 PHTF1Q9UMS5 762 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
TRIM35-201ENST00000305364 K7ENM7 598 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 UFL1O94874 794 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 GAP43P17677 238 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 EPHB2P29323 1055 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 SERPINB4P48594 390 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 CASP5P51878 434 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 RNASELQ05823 741 aaKnown RBP13.92□□□□□ -0.18
TRIM35-201ENST00000305364 BLMHQ13867 455 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 ADGRF4Q8IZF3 695 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 RASGEF1CQ8N431 466 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 STK32AQ8WU08 396 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 MARK3P27448 753 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 BNIP1Q12981 228 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 ZC2HC1CQ53FD0 456 aaPredicted RBP13.92□□□□□ -0.18
TRIM35-201ENST00000305364 ATG4AQ8WYN0 398 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 MYLK2Q9H1R3 596 aa13.92□□□□□ -0.18
TRIM35-201ENST00000305364 HAUS5O94927 633 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 UNC5CO95185 931 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 CREB1P16220 341 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 ITIH2P19823 946 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 RFC5P40937 340 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 TLDC1Q6P9B6 456 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 CCDC89Q8N998 374 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM35-201ENST00000305364 ALG3Q92685 438 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 TRABDQ9H4I3 376 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 ALG13Q9NP73 1137 aaKnown RBP13.91□□□□□ -0.18
TRIM35-201ENST00000305364 METTL5Q9NRN9 209 aaKnown RBP13.91□□□□□ -0.18
TRIM35-201ENST00000305364 PFASO15067 1338 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 ARHGAP42A6NI28 874 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 FOXN3O00409 490 aaPredicted RBP13.91□□□□□ -0.18
TRIM35-201ENST00000305364 MED24O75448 989 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 CBX6O95503 412 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 GH1P01241 217 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 PRKCIP41743 596 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 ECM1Q16610 540 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 SYT2Q8N9I0 419 aaPredicted RBP13.91□□□□□ -0.18
TRIM35-201ENST00000305364 RILPQ96NA2 401 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 RPS6KC1Q96S38 1066 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 POP1Q99575 1024 aaKnown RBP13.91□□□□□ -0.18
TRIM35-201ENST00000305364 MTFR1LQ9H019 292 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 C5P01031 1676 aa13.91□□□□□ -0.18
TRIM35-201ENST00000305364 SMNDC1O75940 238 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM35-201ENST00000305364 FGRP09769 529 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms