RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 DEFB128Q7Z7B8 93 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 P2RX5Q93086 422 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 VWCEQ96DN2 955 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 PDZD7Q9H5P4 517 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 TYW1Q9NV66 732 aaKnown RBP29.73■■■□□ 2.35
HDAC3-201ENST00000305264 ANKFY1Q9P2R3 1169 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 PARNO95453 639 aaKnown RBP29.72■■■□□ 2.35
HDAC3-201ENST00000305264 CXCL10P02778 98 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 ZNF445P59923 1031 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 LRSAM1Q6UWE0 723 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 MED15Q96RN5 788 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 AGPAT3Q9NRZ7 376 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 CSF2RAP15509 400 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 CCNE1P24864 410 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 PLEKHG4Q58EX7 1191 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 HAPLN2Q9GZV7 340 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 ZMYND8Q9ULU4 1186 aaPredicted RBP29.72■■■□□ 2.35
HDAC3-201ENST00000305264 TNFSF13BQ9Y275 285 aa29.72■■■□□ 2.35
HDAC3-201ENST00000305264 A0A1B0GUA9 196 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 PDXKO00764 312 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 ABLIM1O14639 778 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 PROZP22891 400 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 ADSSP30520 456 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 TCTN1Q2MV58 587 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 NOTUMQ6P988 496 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 HS2ST1Q7LGA3 356 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 PTPRHQ9HD43 1115 aa29.71■■■□□ 2.35
HDAC3-201ENST00000305264 MGEA5O60502 916 aa29.7■■■□□ 2.35
HDAC3-201ENST00000305264 TOM1L1O75674 476 aa29.7■■■□□ 2.35
HDAC3-201ENST00000305264 AXLP30530 894 aa29.7■■■□□ 2.35
HDAC3-201ENST00000305264 NCBP1Q09161 790 aaKnown RBP29.7■■■□□ 2.35
HDAC3-201ENST00000305264 ANKRD40Q6AI12 368 aa29.7■■■□□ 2.35
HDAC3-201ENST00000305264 DBF4BQ8NFT6 615 aa29.7■■■□□ 2.35
HDAC3-201ENST00000305264 CBWD1Q9BRT8 395 aa29.7■■■□□ 2.35
HDAC3-201ENST00000305264 TRAF3IP3Q9Y228 551 aa29.7■■■□□ 2.35
HDAC3-201ENST00000305264 CLIC2O15247 247 aa29.7■■■□□ 2.34
HDAC3-201ENST00000305264 RFC2P35250 354 aa29.7■■■□□ 2.34
HDAC3-201ENST00000305264 TMEM199Q8N511 208 aa29.7■■■□□ 2.34
HDAC3-201ENST00000305264 ZNF568Q3ZCX4 644 aa29.69■■■□□ 2.34
HDAC3-201ENST00000305264 TTI2Q6NXR4 508 aa29.69■■■□□ 2.34
HDAC3-201ENST00000305264 MPZL3Q6UWV2 235 aa29.69■■■□□ 2.34
HDAC3-201ENST00000305264 ZBTB33Q86T24 672 aa29.69■■■□□ 2.34
HDAC3-201ENST00000305264 BADQ92934 168 aa29.69■■■□□ 2.34
HDAC3-201ENST00000305264 RWDD2AQ9UIY3 292 aa29.69■■■□□ 2.34
HDAC3-201ENST00000305264 STYXL1Q9Y6J8 313 aa29.69■■■□□ 2.34
HDAC3-201ENST00000305264 ERCC5P28715 1186 aaPredicted RBP29.68■■■□□ 2.34
HDAC3-201ENST00000305264 N4BP3O15049 544 aa29.68■■■□□ 2.34
HDAC3-201ENST00000305264 HARSP12081 509 aaKnown RBP29.68■■■□□ 2.34
HDAC3-201ENST00000305264 DSC3Q14574 896 aa29.68■■■□□ 2.34
HDAC3-201ENST00000305264 ARMCX5Q6P1M9 558 aa29.68■■■□□ 2.34
HDAC3-201ENST00000305264 POMGNT1Q8WZA1 660 aa29.68■■■□□ 2.34
HDAC3-201ENST00000305264 SEPT8Q92599 483 aa29.68■■■□□ 2.34
HDAC3-201ENST00000305264 TCHPQ9BT92 498 aa29.68■■■□□ 2.34
HDAC3-201ENST00000305264 EIF2AQ9BY44 585 aaKnown RBP29.68■■■□□ 2.34
HDAC3-201ENST00000305264 CDT1Q9H211 546 aa29.68■■■□□ 2.34
HDAC3-201ENST00000305264 CLDN3O15551 220 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 CALUO43852 315 aaPredicted RBP29.67■■■□□ 2.34
HDAC3-201ENST00000305264 MATR3P43243 847 aaKnown RBP eCLIP29.67■■■□□ 2.34
HDAC3-201ENST00000305264 LRRC63Q05C16 580 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 TWF2Q6IBS0 349 aaKnown RBP29.67■■■□□ 2.34
HDAC3-201ENST00000305264 SLC27A1Q6PCB7 646 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 GOLGA5Q8TBA6 731 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 LINC01599Q8WXQ3 324 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 TSG101Q99816 390 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 DUSP9Q99956 384 aaKnown RBP29.67■■■□□ 2.34
HDAC3-201ENST00000305264 TSPY26PQ9H489 355 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 PCIF1Q9H4Z3 704 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 CHST12Q9NRB3 414 aa29.67■■■□□ 2.34
HDAC3-201ENST00000305264 BICDL2A1A5D9 508 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 NR3C1P04150 777 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 MCL1Q07820 350 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 NOLC1Q14978 699 aaKnown RBP eCLIP29.66■■■□□ 2.34
HDAC3-201ENST00000305264 CT47A1Q5JQC4 288 aaPredicted RBP29.66■■■□□ 2.34
HDAC3-201ENST00000305264 UBXN11Q5T124 520 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 ZSWIM2Q8NEG5 633 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 EEF2KMTQ96G04 330 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 A0A0B4J269 797 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 NPTXRO95502 500 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 CYP2J2P51589 502 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 SNRPFP62306 86 aaKnown RBP29.66■■■□□ 2.34
HDAC3-201ENST00000305264 EDRF1Q3B7T1 1238 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 CGNQ9P2M7 1197 aaKnown RBP29.66■■■□□ 2.34
HDAC3-201ENST00000305264 MICAL3Q7RTP6 2002 aa29.66■■■□□ 2.34
HDAC3-201ENST00000305264 CEP290O15078 2479 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 ZSCAN20P17040 1043 aaPredicted RBP29.65■■■□□ 2.34
HDAC3-201ENST00000305264 GARTP22102 1010 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 SLFN12LQ6IEE8 588 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 APBB2Q92870 758 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 CCDC51Q96ER9 411 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 ADAM2Q99965 735 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 ADPGKQ9BRR6 497 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 MSTO1Q9BUK6 570 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 NAT10Q9H0A0 1025 aaKnown RBP29.65■■■□□ 2.34
HDAC3-201ENST00000305264 HSPBP1Q9NZL4 362 aa29.65■■■□□ 2.34
HDAC3-201ENST00000305264 TNRC18O15417 2968 aaPredicted RBP29.65■■■□□ 2.34
HDAC3-201ENST00000305264 NR2F2P24468 414 aa29.64■■■□□ 2.34
HDAC3-201ENST00000305264 ZNF165P49910 485 aa29.64■■■□□ 2.34
HDAC3-201ENST00000305264 C12orf56Q8IXR9 622 aa29.64■■■□□ 2.34
HDAC3-201ENST00000305264 CEP120Q8N960 986 aa29.64■■■□□ 2.34
HDAC3-201ENST00000305264 SAAL1Q96ER3 474 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms