RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 KIF9Q9HAQ2 790 aa17.43■□□□□ 0.38
LONRF3-201ENST00000304778 PCDHB13Q9Y5F0 798 aa17.43■□□□□ 0.38
LONRF3-201ENST00000304778 KLHL33A6NCF5 533 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 TGFB1I1O43294 461 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 ZBED4O75132 1171 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 BCRP11274 1271 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 MUTP22033 750 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 FLT3P36888 993 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 HSD17B3P37058 310 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 PEX19P40855 299 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 NPEPPSP55786 919 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 RPS6P62753 249 aaKnown RBP17.42■□□□□ 0.38
LONRF3-201ENST00000304778 ITGB3BPQ13352 177 aaPredicted RBP17.42■□□□□ 0.38
LONRF3-201ENST00000304778 TKFCQ3LXA3 575 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
LONRF3-201ENST00000304778 LRRC45Q96CN5 670 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 BORCS6Q96GS4 357 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 DDX47Q9H0S4 455 aaKnown RBP17.42■□□□□ 0.38
LONRF3-201ENST00000304778 TMBIM4Q9HC24 238 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 GOLGA6L10A6NI86 522 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 KRIT1O00522 736 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 EIF3DO15371 548 aaKnown RBP eCLIP17.42■□□□□ 0.38
LONRF3-201ENST00000304778 EIF2AK2P19525 551 aaKnown RBP17.42■□□□□ 0.38
LONRF3-201ENST00000304778 BACE1P56817 501 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 PCNX4Q63HM2 1172 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 NT5DC3Q86UY8 548 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 SPDL1Q96EA4 605 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 RSRC1Q96IZ7 334 aaKnown RBP17.42■□□□□ 0.38
LONRF3-201ENST00000304778 ZNF112Q9UJU3 913 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 UBIAD1Q9Y5Z9 338 aa17.42■□□□□ 0.38
LONRF3-201ENST00000304778 DHX15O43143 795 aaKnown RBP17.41■□□□□ 0.38
LONRF3-201ENST00000304778 GFPT2O94808 682 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 PTPRAP18433 802 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 SCTRP47872 440 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 UAP1Q16222 522 aaPredicted RBP17.41■□□□□ 0.38
LONRF3-201ENST00000304778 MIER3Q7Z3K6 550 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 DAAM2Q86T65 1068 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 TRPM4Q8TD43 1214 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
LONRF3-201ENST00000304778 ATG4CQ96DT6 458 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 NEUROG2Q9H2A3 272 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 IKZF4Q9H2S9 585 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 AGO4Q9HCK5 861 aaKnown RBP17.41■□□□□ 0.38
LONRF3-201ENST00000304778 VWA5AO00534 786 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 STAT1P42224 750 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 ZC2HC1CQ53FD0 456 aaPredicted RBP17.41■□□□□ 0.38
LONRF3-201ENST00000304778 OLIG1Q8TAK6 271 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 HES6Q96HZ4 224 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 SLITRK6Q9H5Y7 841 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 PARVGQ9HBI0 331 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 FRMPD4Q14CM0 1322 aa17.41■□□□□ 0.38
LONRF3-201ENST00000304778 H0YGN5 161 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 EVI5O60447 810 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 SLC8A3P57103 927 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 NFIL3Q16649 462 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 NIPA1Q7RTP0 329 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 FAM186BQ8IYM0 893 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 ZNF280CQ8ND82 737 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 LNX1Q8TBB1 728 aaPredicted RBP17.4■□□□□ 0.38
LONRF3-201ENST00000304778 PICK1Q9NRD5 415 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 SPATS2LQ9NUQ6 558 aaKnown RBP17.4■□□□□ 0.38
LONRF3-201ENST00000304778 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 NFS1Q9Y697 457 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 F8VZ95 297 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 MYZAPP0CAP1 466 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 PSMC2P35998 433 aaKnown RBP17.4■□□□□ 0.38
LONRF3-201ENST00000304778 KSR1Q8IVT5 923 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
LONRF3-201ENST00000304778 BAIAP2L1Q9UHR4 511 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 NCANO14594 1321 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 MYCLP12524 364 aaPredicted RBP17.4■□□□□ 0.38
LONRF3-201ENST00000304778 SOX5P35711 763 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 GALCP54803 685 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 MTMR1Q13613 665 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 PGM5Q15124 567 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 NSMFQ6X4W1 530 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 RNF207Q6ZRF8 634 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 MAB21L3Q8N8X9 362 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 SLC30A5Q8TAD4 765 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 THOC1Q96FV9 657 aaKnown RBP17.4■□□□□ 0.38
LONRF3-201ENST00000304778 AS3MTQ9HBK9 375 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 MAP3K20Q9NYL2 800 aaKnown RBP17.4■□□□□ 0.38
LONRF3-201ENST00000304778 ZHX2Q9Y6X8 837 aa17.4■□□□□ 0.38
LONRF3-201ENST00000304778 GMNCA6NCL1 334 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 SRRM3A6NNA2 597 aaPredicted RBP17.39■□□□□ 0.37
LONRF3-201ENST00000304778 ITGA4P13612 1032 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 APOBEC3FQ8IUX4 373 aaKnown RBP17.39■□□□□ 0.37
LONRF3-201ENST00000304778 FIZ1Q96SL8 496 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 MKNK1Q9BUB5 465 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 AMACRQ9UHK6 382 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 DOCK1Q14185 1865 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 ARHGEF35A5YM69 484 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 CTNNA1P35221 906 aaKnown RBP17.39■□□□□ 0.37
LONRF3-201ENST00000304778 ZNF131P52739 623 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 HMGCS2P54868 508 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 IFFO1Q0D2I5 559 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 MTMR3Q13615 1198 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 AP1ARQ63HQ0 302 aa17.39■□□□□ 0.37
LONRF3-201ENST00000304778 ARFGAP2Q8N6H7 521 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms