RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 EVI5O60447 810 aa13.91□□□□□ -0.18
ABR-202ENST00000302538 EMC2Q15006 297 aa13.91□□□□□ -0.18
ABR-202ENST00000302538 PPP4R4Q6NUP7 873 aa13.91□□□□□ -0.18
ABR-202ENST00000302538 TDRD7Q8NHU6 1098 aaKnown RBP13.91□□□□□ -0.18
ABR-202ENST00000302538 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
ABR-202ENST00000302538 SPZ1Q9BXG8 430 aa13.91□□□□□ -0.18
ABR-202ENST00000302538 TRIM17Q9Y577 477 aa13.91□□□□□ -0.18
ABR-202ENST00000302538 DFFAO00273 331 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 ASAP2O43150 1006 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 EYA4O95677 639 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 RFX5P48382 616 aaPredicted RBP13.9□□□□□ -0.18
ABR-202ENST00000302538 THEMIS2Q5TEJ8 643 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 RBM41Q96IZ5 413 aaKnown RBP13.9□□□□□ -0.18
ABR-202ENST00000302538 GINM1Q9NU53 330 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 TMED2Q15363 201 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
ABR-202ENST00000302538 CCDC157Q569K6 752 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 C16orf86Q6ZW13 317 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 LRRC71Q8N4P6 559 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 CEP120Q8N960 986 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 SNX19Q92543 992 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 DHX35Q9H5Z1 703 aaKnown RBP13.9□□□□□ -0.18
ABR-202ENST00000302538 TTC4O95801 387 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 PCK1P35558 622 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 PRKCEQ02156 737 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 PROM2Q8N271 834 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 PRMT6Q96LA8 375 aaPredicted RBP13.9□□□□□ -0.18
ABR-202ENST00000302538 TMEM247A6NEH6 219 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 GSTA4O15217 222 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 RFC5P40937 340 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
ABR-202ENST00000302538 SBK1Q52WX2 424 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 AFF4Q9UHB7 1163 aaKnown RBP13.9□□□□□ -0.18
ABR-202ENST00000302538 LCMT1Q9UIC8 334 aa13.9□□□□□ -0.18
ABR-202ENST00000302538 MANSC4A6NHS7 340 aaPredicted RBP13.89□□□□□ -0.19
ABR-202ENST00000302538 CD4P01730 458 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 HDLBPQ00341 1268 aaKnown RBP13.89□□□□□ -0.19
ABR-202ENST00000302538 TAF1BQ53T94 588 aaPredicted RBP13.89□□□□□ -0.19
ABR-202ENST00000302538 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
ABR-202ENST00000302538 SLC35F6Q8N357 371 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 INTS2Q9H0H0 1204 aaKnown RBP13.89□□□□□ -0.19
ABR-202ENST00000302538 PCDHA13Q9Y5I0 950 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 H3BRJ5 948 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 DNAJC6O75061 913 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 TOM1L1O75674 476 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 CXCL9Q07325 125 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 KCNH2Q12809 1159 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 PTK2BQ14289 1009 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 PBKQ96KB5 322 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 PP2D1A8MPX8 630 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 F5H423 210 aaPredicted RBP13.89□□□□□ -0.19
ABR-202ENST00000302538 TRPA1O75762 1119 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 AP1B1Q10567 949 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 LRRC8AQ8IWT6 810 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 TRIM42Q8IWZ5 723 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 SMAP1Q8IYB5 467 aaPredicted RBP13.89□□□□□ -0.19
ABR-202ENST00000302538 RAB42Q8N4Z0 105 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 COLEC11Q9BWP8 271 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 MID2Q9UJV3 735 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 PDGFRBP09619 1106 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 SUPT20HL2P0C7V6 817 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 TAC1P20366 129 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 CXCR5P32302 372 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 CDR2Q01850 454 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 CUL4AQ13619 759 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 RESP18Q5W5W9 173 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 HVCN1Q96D96 273 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 TIPINQ9BVW5 301 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 NDFIP2Q9NV92 336 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 PCDHB8Q9UN66 801 aa13.89□□□□□ -0.19
ABR-202ENST00000302538 TTI1O43156 1089 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 ZRANB2O95218 330 aaKnown RBP eCLIP13.88□□□□□ -0.19
ABR-202ENST00000302538 RAG1P15918 1043 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 GTF2H3Q13889 308 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
ABR-202ENST00000302538 PYROXD1Q8WU10 500 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 HEMGNQ9BXL5 484 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 PLEKHA5Q9HAU0 1116 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 COL3A1P02461 1466 aaPredicted RBP13.88□□□□□ -0.19
ABR-202ENST00000302538 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 ACOT2P49753 483 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
ABR-202ENST00000302538 SCG3Q8WXD2 468 aaKnown RBP13.88□□□□□ -0.19
ABR-202ENST00000302538 DCUN1D1Q96GG9 259 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 TSR3Q9UJK0 312 aaKnown RBP13.88□□□□□ -0.19
ABR-202ENST00000302538 CASP1P29466 404 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 CAP2P40123 477 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 HSD17B4P51659 736 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 IL9RQ01113 521 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 KRT31Q15323 416 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 DEFB128Q7Z7B8 93 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 TTC13Q8NBP0 860 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 FBXL13Q8NEE6 735 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 SEPT8Q92599 483 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 MOV10L1Q9BXT6 1211 aaKnown RBP13.88□□□□□ -0.19
ABR-202ENST00000302538 GLIS2Q9BZE0 524 aaPredicted RBP13.88□□□□□ -0.19
ABR-202ENST00000302538 MROH8Q9H579 483 aa13.88□□□□□ -0.19
ABR-202ENST00000302538 TRIM49BA6NDI0 452 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms