RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PRMT1Q99873 361 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 LIMA1Q9UHB6 759 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 BAZ2BQ9UIF8 2168 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 CCDC195A0A1B0GUA6 201 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 K7ERI5 159 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ANGPT2O15123 496 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 PSMD3O43242 534 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 CAPRIN1Q14444 709 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 NCAPG2Q86XI2 1143 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 SCFD1Q8WVM8 642 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 RNPC3Q96LT9 517 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 DACH2Q96NX9 599 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 EPAS1Q99814 870 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 FRMD8Q9BZ67 464 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 C2orf40Q9H1Z8 148 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 CDHR2Q9BYE9 1310 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 GTPBP10A4D1E9 387 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 KRT14P02533 472 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 PSMC1P62191 440 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 GUCY1A3Q02108 690 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 TSTA3Q13630 321 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ANGPTL8Q6UXH0 198 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 TRPM8Q7Z2W7 1104 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 EEF2KMTQ96G04 330 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 TOPORSQ9NS56 1045 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 SUFUQ9UMX1 484 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 MYH8P13535 1937 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 UBN2Q6ZU65 1347 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 USP42Q9H9J4 1324 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 TNPO2O14787 897 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ATICP31939 592 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 DSG1Q02413 1049 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 MTHFD1LQ6UB35 978 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 C4orf22Q6V702 233 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 OSBP2Q969R2 916 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 PAGR1Q9BTK6 254 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 OLA1Q9NTK5 396 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ZNF229Q9UJW7 825 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 PPLO60437 1756 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ABCB11O95342 1321 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ELF1P32519 619 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 UGP2Q16851 508 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 LZICQ8WZA0 190 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 NCKAP5LQ9HCH0 1330 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 FAM107AO95990 144 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 KCNA3P22001 575 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 VAMP7P51809 220 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 KRT76Q01546 638 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 PDIA2Q13087 525 aaKnown RBP8.09□□□□□ -1.12
SF3B3-201ENST00000302516 SGMS1Q86VZ5 419 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 KSR1Q8IVT5 923 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF473Q8WTR7 871 aaKnown RBP8.09□□□□□ -1.12
SF3B3-201ENST00000302516 TSSK1BQ9BXA7 367 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 PCIF1Q9H4Z3 704 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 BARHL2Q9NY43 387 aa8.09□□□□□ -1.12
SF3B3-201ENST00000302516 MARK3P27448 753 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 SDC4P31431 198 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 KRT17Q04695 432 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 ACAP3Q96P50 834 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 AP5M1Q9H0R1 490 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 RANBP17Q9H2T7 1088 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 FEM1BQ9UK73 627 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 MYO3AQ8NEV4 1616 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 NEDD4P46934 1319 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 PDS5AQ29RF7 1337 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 MYO3BQ8WXR4 1341 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 E7ENQ6 273 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 ITIH2P19823 946 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 USP11P51784 963 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 HOMEZQ8IX15 550 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 NDUFA13Q9P0J0 144 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 SLC9A2Q9UBY0 812 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 LRRC31Q6UY01 552 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 MAML3Q96JK9 1138 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF18P17022 549 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 CD58P19256 250 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 CDK8P49336 464 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 IZUMO3Q5VZ72 239 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 RYBPQ8N488 228 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 DCPSQ96C86 337 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 DCTN4Q9UJW0 460 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 GDAQ9Y2T3 454 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 CFAP69A5D8W1 941 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 MB21D2Q8IYB1 491 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 DTX3LQ8TDB6 740 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 IFT43Q96FT9 208 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 BFARQ9NZS9 450 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 NXF1Q9UBU9 619 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 CDY2AQ9Y6F7 541 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 CDY1Q9Y6F8 540 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 RANBP1P43487 201 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 SCNN1DP51172 638 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 EPHB1P54762 984 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 CORO7P57737 925 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 RC3H1Q5TC82 1133 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 EFL1Q7Z2Z2 1120 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 THEM5Q8N1Q8 247 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 BHMT2Q9H2M3 363 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 ANP32DO95626 131 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms