RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 SKIP12755 728 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 NPTX2P47972 431 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 RBM10P98175 930 aaKnown RBP12.46□□□□□ -0.41
CLCC1-201ENST00000302500 TFDP1Q14186 410 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 LONRF3Q496Y0 759 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 EEF1DP3Q658K8 133 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 NOTUMQ6P988 496 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 MAEAQ7L5Y9 396 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 CDR2LQ86X02 465 aaPredicted RBP12.46□□□□□ -0.41
CLCC1-201ENST00000302500 COLGALT2Q8IYK4 626 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 EFHBQ8N7U6 833 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 ADAMTS19Q8TE59 1207 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.418e-8■■□□□ 12.7
CLCC1-201ENST00000302500 ZFP42Q96MM3 310 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 MRPL9Q9BYD2 267 aaKnown RBP12.46□□□□□ -0.41
CLCC1-201ENST00000302500 ZBP1Q9H171 429 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 TLR9Q9NR96 1032 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 IRAK3Q9Y616 596 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 WDFY4Q6ZS81 3184 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 MTCL1Q9Y4B5 1905 aaKnown RBP12.45□□□□□ -0.42
CLCC1-201ENST00000302500 GRXCR2A6NFK2 248 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 ARL5CA6NH57 179 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 F8W810 466 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 INO80B-WBP1J3KQ70 363 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 PTGESO14684 152 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 SLC11A1P49279 550 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
CLCC1-201ENST00000302500 ZNF131P52739 623 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 DUSP6Q16828 381 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 KRT79Q5XKE5 535 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 SLC27A1Q6PCB7 646 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 KIFAP3Q92845 792 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 IGSF21Q96ID5 467 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 ZNF558Q96NG5 402 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 RSAD1Q9HA92 442 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 PRMT7Q9NVM4 692 aaPredicted RBP12.45□□□□□ -0.42
CLCC1-201ENST00000302500 PCDHB12Q9Y5F1 795 aa12.45□□□□□ -0.42
CLCC1-201ENST00000302500 A0A087X0B3 334 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 HIP1RO75146 1068 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 PAPLNO95428 1278 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 BRD1O95696 1058 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 IL9P15248 144 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 PDCP20941 246 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 KCNA5P22460 613 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 LONP1P36776 959 aaKnown RBP12.44□□□□□ -0.42
CLCC1-201ENST00000302500 COASYQ13057 564 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 PKP1Q13835 747 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 XKR4Q5GH76 650 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 GLB1LQ6UWU2 654 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 RNF169Q8NCN4 708 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 SMRP1Q8NCR6 262 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 CNNM3Q8NE01 707 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 FEZF2Q8TBJ5 459 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 SPIRE2Q8WWL2 714 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 GAD1Q99259 594 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 RAB34Q9BZG1 259 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 HAPLN2Q9GZV7 340 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 SPG21Q9NZD8 308 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 DNM3Q9UQ16 869 aa12.44□□□□□ -0.42
CLCC1-201ENST00000302500 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
CLCC1-201ENST00000302500 TCHHQ07283 1943 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 VPS37CA5D8V6 355 aaPredicted RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 C2orf71A6NGG8 1288 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 H3BQ06 376 aaPredicted RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 STX6O43752 255 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 FAM189A1O60320 539 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 ABCB7O75027 752 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 ERLIN2O94905 339 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 BMP15O95972 392 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 IBSPP21815 317 aaPredicted RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 IGFBP6P24592 240 aaPredicted RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 PPM1AP35813 382 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 MLH1P40692 756 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 PDE12Q6L8Q7 609 aaKnown RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 CD300LGQ6UXG3 332 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 ALKAL1Q6UXT8 129 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 DDX53Q86TM3 631 aaKnown RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 CABP7Q86V35 215 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 FAM178BQ8IXR5 827 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 MRPL43Q8N983 215 aaKnown RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 TMEM161BQ8NDZ6 487 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 SUSD6Q92537 303 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
CLCC1-201ENST00000302500 PGBD4Q96DM1 585 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 EPSTI1Q96J88 318 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 TMEM175Q9BSA9 504 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 S1PR5Q9H228 398 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 C17orf75Q9HAS0 396 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 AAASQ9NRG9 546 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 KCND2Q9NZV8 630 aa12.43□□□□□ -0.42
CLCC1-201ENST00000302500 GIT1Q9Y2X7 761 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms