RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 PCDHA5Q9Y5H7 936 aa9.71□□□□□ -0.86
VPREB1-201ENST00000302273 CLDN3O15551 220 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 GCNT3O95395 438 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 LDHAP00338 332 aaKnown RBP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 MCF2P10911 925 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 GARTP22102 1010 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 PROZP22891 400 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 STIM1Q13586 685 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 KNOP1Q1ED39 458 aaKnown RBP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 ATF7IP2Q5U623 682 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 RBM43Q6ZSC3 357 aaKnown RBP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 MRPL10Q7Z7H8 261 aaKnown RBP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 NPAS4Q8IUM7 802 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 C12orf56Q8IXR9 622 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 TDHQ8IZJ6 230 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 STAMQ92783 540 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 ACO2Q99798 780 aaKnown RBP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 ADAM2Q99965 735 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 GBP3Q9H0R5 595 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 NUP62CLQ9H1M0 184 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 BLZF1Q9H2G9 400 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 TMX1Q9H3N1 280 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 PLEKHA5Q9HAU0 1116 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 TBC1D7Q9P0N9 293 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 PIN4Q9Y237 131 aaKnown RBP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 SLC4A7Q9Y6M7 1214 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 ADGRA3Q8IWK6 1321 aa9.7□□□□□ -0.86
VPREB1-201ENST00000302273 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
VPREB1-201ENST00000302273 A0A0B4J269 797 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 GOLGA6L3A6NEY3 463 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 PDXKO00764 312 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 HNRNPDLO14979 420 aaKnown RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 INPPL1O15357 1258 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 RPL13P26373 211 aaKnown RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 LIG4P49917 911 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 ENPEPQ07075 957 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 MCL1Q07820 350 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 STK4Q13043 487 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 NFIL3Q16649 462 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 LRIT3Q3SXY7 679 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 TWF2Q6IBS0 349 aaKnown RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 MPZL3Q6UWV2 235 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 HS2ST1Q7LGA3 356 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 RTN4RL1Q86UN2 441 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 SLC9A9Q8IVB4 645 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 CD302Q8IX05 232 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 MYOCDQ8IZQ8 938 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 SYCP3Q8IZU3 236 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 MLKLQ8NB16 471 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 SCFD1Q8WVM8 642 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 KAT6AQ92794 2004 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 DHTKD1Q96HY7 919 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 TCHPQ9BT92 498 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 TRIM6Q9C030 488 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 TOPORSQ9NS56 1045 aaPredicted RBP9.69□□□□□ -0.86
VPREB1-201ENST00000302273 FAM105AQ9NUU6 356 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 DACH1Q9UI36 760 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 TRAF3IP3Q9Y228 551 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 GIT1Q9Y2X7 761 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 INSL6Q9Y581 213 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 PCDHB7Q9Y5E2 793 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 PCDHB2Q9Y5E7 798 aa9.69□□□□□ -0.86
VPREB1-201ENST00000302273 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 GJB5O95377 273 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 CAVIN2O95810 425 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 NMT1P30419 496 aaKnown RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 EPHB4P54760 987 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 WDR5P61964 334 aaKnown RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 PNOCQ13519 176 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 MORC3Q14149 939 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 TMEM132AQ24JP5 1023 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 EDRF1Q3B7T1 1238 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 CCDC183Q5T5S1 534 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 OTOP2Q7RTS6 562 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 ECHDC2Q86YB7 292 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 GRAMD1CQ8IYS0 662 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 BICD1Q96G01 975 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 RNPC3Q96LT9 517 aaKnown RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 PPP1R16BQ96T49 567 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 RAD9AQ99638 391 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 KIFC3Q9BVG8 833 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 TARS2Q9BW92 718 aaKnown RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 MRPL9Q9BYD2 267 aaKnown RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 PDZD7Q9H5P4 517 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 SLC39A2Q9NP94 309 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 TYW1Q9NV66 732 aaKnown RBP9.68□□□□□ -0.86
VPREB1-201ENST00000302273 STK39Q9UEW8 545 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 LRFN2Q9ULH4 789 aa9.68□□□□□ -0.86
VPREB1-201ENST00000302273 BICDL2A1A5D9 508 aa9.67□□□□□ -0.86
VPREB1-201ENST00000302273 PSMA7O14818 248 aa9.67□□□□□ -0.86
VPREB1-201ENST00000302273 MAPK13O15264 365 aa9.67□□□□□ -0.86
VPREB1-201ENST00000302273 OGTO15294 1046 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms