RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 NCAPHQ15003 741 aa22.11■■□□□ 1.13
LTBP3-201ENST00000301873 SCN4BQ8IWT1 228 aa22.11■■□□□ 1.13
LTBP3-201ENST00000301873 SYT2Q8N9I0 419 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-201ENST00000301873 CYTH2Q99418 400 aa22.11■■□□□ 1.13
LTBP3-201ENST00000301873 TRIM51Q9BSJ1 452 aa22.11■■□□□ 1.13
LTBP3-201ENST00000301873 KLHL11Q9NVR0 708 aa22.11■■□□□ 1.13
LTBP3-201ENST00000301873 LRFN2Q9ULH4 789 aa22.11■■□□□ 1.13
LTBP3-201ENST00000301873 KRT7P08729 469 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 FGFR4P22455 802 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 EDRF1Q3B7T1 1238 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 TMTC4Q5T4D3 741 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 IZUMO3Q5VZ72 239 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 PLA2G4FQ68DD2 849 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 CCNI2Q6ZMN8 369 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 TRIM56Q9BRZ2 755 aaKnown RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 VPS11Q9H270 941 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 PDS5AQ29RF7 1337 aaKnown RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 SPATA31A1Q5TZJ5 1347 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 CREB3O43889 395 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 CD44P16070 742 aaKnown RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 RPA1P27694 616 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 COG7P83436 770 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 TTLL4Q14679 1199 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 COG2Q14746 738 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 TAF11Q15544 211 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 HHIPL2Q6UWX4 724 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 ENOSF1Q7L5Y1 443 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 RAB44Q7Z6P3 723 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 SPDL1Q96EA4 605 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 CHORDC1Q9UHD1 332 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 PLEKP08567 350 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 RFX1P22670 979 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 SATB1Q01826 763 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 CRLF3Q8IUI8 442 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 FBXO28Q9NVF7 368 aa22.1■■□□□ 1.13
LTBP3-201ENST00000301873 TPX2Q9ULW0 747 aaKnown RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-201ENST00000301873 CDH6P55285 790 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 VCPKMTQ9H867 229 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 IP6K2Q9UHH9 426 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 TARSL2A2RTX5 802 aaKnown RBP22.09■■□□□ 1.13
LTBP3-201ENST00000301873 FDX1P10109 184 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 PMLP29590 882 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 ATG16L1Q676U5 607 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 DDX42Q86XP3 938 aaKnown RBP eCLIP22.09■■□□□ 1.13
LTBP3-201ENST00000301873 PDZD8Q8NEN9 1154 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 CPA5Q8WXQ8 436 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 PPP1R9AQ9ULJ8 1098 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 ZNRF3Q9ULT6 936 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 TYW5A2RUC4 315 aaKnown RBP22.09■■□□□ 1.13
LTBP3-201ENST00000301873 DGAT1O75907 488 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 EPHB1P54762 984 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 EXT2Q93063 718 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 VPS39Q96JC1 886 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 TEX13BQ9BXU2 312 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 DHX35Q9H5Z1 703 aaKnown RBP22.09■■□□□ 1.13
LTBP3-201ENST00000301873 DLC1Q96QB1 1528 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 TBX3O15119 743 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 CAV1Q03135 178 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 TNFAIP2Q03169 654 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 NLRP14Q86W24 1093 aa22.09■■□□□ 1.13
LTBP3-201ENST00000301873 WDR46O15213 610 aaKnown RBP22.08■■□□□ 1.13
LTBP3-201ENST00000301873 NYAP1Q6ZVC0 841 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 C9orf72Q96LT7 481 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 C2orf40Q9H1Z8 148 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 CD163L1Q9NR16 1453 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 PPRC1Q5VV67 1664 aaKnown RBP22.08■■□□□ 1.13
LTBP3-201ENST00000301873 RTN2O75298 545 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 MYL3P08590 195 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 XPAP23025 273 aaPredicted RBP22.08■■□□□ 1.13
LTBP3-201ENST00000301873 CIITAP33076 1130 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 CARSP49589 748 aaKnown RBP22.08■■□□□ 1.13
LTBP3-201ENST00000301873 KRT17Q04695 432 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 FBXO41Q8TF61 875 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 SLC13A1Q9BZW2 595 aa22.08■■□□□ 1.13
LTBP3-201ENST00000301873 PIK3R2O00459 728 aa22.08■■□□□ 1.12
LTBP3-201ENST00000301873 AP5Z1O43299 807 aa22.08■■□□□ 1.12
LTBP3-201ENST00000301873 SLC37A4O43826 429 aa22.08■■□□□ 1.12
LTBP3-201ENST00000301873 TTC4O95801 387 aa22.08■■□□□ 1.12
LTBP3-201ENST00000301873 SNRNP35Q16560 246 aaKnown RBP22.08■■□□□ 1.12
LTBP3-201ENST00000301873 TTC36A6NLP5 189 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 A8MXQ7 604 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 GYG2O15488 501 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 GGPS1O95749 300 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 KRT3P12035 628 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 KCNJ1P48048 391 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 IL1RL1Q01638 556 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 NFIAQ12857 509 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 ART3Q13508 389 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 EPC2Q52LR7 807 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 XKR3Q5GH77 459 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 KIAA1755Q5JYT7 1200 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 ENTPD3O75355 529 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 LUC7L3O95232 432 aaKnown RBP22.07■■□□□ 1.12
LTBP3-201ENST00000301873 KITP10721 976 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 CATSPER3Q86XQ3 398 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 MAD2L2Q9UI95 211 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 KIF3CO14782 793 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 SPAG7O75391 227 aa22.07■■□□□ 1.12
LTBP3-201ENST00000301873 HSPA4LO95757 839 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms