RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 ZFP69BQ9UJL9 534 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 L1RE1Q9UN81 338 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 UBE4BO95155 1302 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 UBE2Q2LH0YL09 131 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 RAD51CO43502 376 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 IZUMO3Q5VZ72 239 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 AP1ARQ63HQ0 302 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 ARMCX2Q7L311 632 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 GSDMBQ8TAX9 411 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 C1orf54Q8WWF1 131 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 ZIM3Q96PE6 472 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 RNF146Q9NTX7 359 aa20.58■□□□□ 0.89
TSR1-201ENST00000301364 TTC7AQ9ULT0 858 aaPredicted RBP20.58■□□□□ 0.89
TSR1-201ENST00000301364 ARHGEF28Q8N1W1 1705 aaKnown RBP20.58■□□□□ 0.89
TSR1-201ENST00000301364 KIAA0391O15091 583 aaKnown RBP20.58■□□□□ 0.88
TSR1-201ENST00000301364 SLC9A1P19634 815 aa20.58■□□□□ 0.88
TSR1-201ENST00000301364 SCP2P22307 547 aa20.58■□□□□ 0.88
TSR1-201ENST00000301364 CARSP49589 748 aaKnown RBP20.58■□□□□ 0.88
TSR1-201ENST00000301364 AP3M2P53677 418 aa20.58■□□□□ 0.88
TSR1-201ENST00000301364 STOML1Q9UBI4 398 aa20.58■□□□□ 0.88
TSR1-201ENST00000301364 EIF3DO15371 548 aaKnown RBP eCLIP20.57■□□□□ 0.88
TSR1-201ENST00000301364 GPS1Q13098 491 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 SEC23AQ15436 765 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 ANKRD20A4Q4UJ75 823 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 ANKRD20A8PQ5CZ79 823 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 ANKRD20A2Q5SQ80 823 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 ANKRD20A1Q5TYW2 823 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 LDHDQ86WU2 507 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 ATP11CQ8NB49 1132 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 SERPINI1Q99574 410 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 CYP26A1O43174 497 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 TAP1Q03518 808 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 PAPD7Q5XG87 772 aaKnown RBP20.57■□□□□ 0.88
TSR1-201ENST00000301364 EFHD1Q9BUP0 239 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 PCDHA10Q9Y5I2 948 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 LSP1P33241 339 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 EEPD1Q7L9B9 569 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 DPP9Q86TI2 863 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 MLXIPLQ9NP71 852 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 HOXC10Q9NYD6 342 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 TTC4O95801 387 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 FGFR2P21802 821 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 FAM47CQ5HY64 1035 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 HDAC11Q96DB2 347 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 JMJD4Q9H9V9 463 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 PARVAQ9NVD7 372 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 SUCLA2Q9P2R7 463 aaPredicted RBP20.57■□□□□ 0.88
TSR1-201ENST00000301364 KRT3P12035 628 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 RBBP5Q15291 538 aaKnown RBP20.57■□□□□ 0.88
TSR1-201ENST00000301364 SLC27A3Q5K4L6 730 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 KLHDC7AQ5VTJ3 777 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 TTI2Q6NXR4 508 aa20.57■□□□□ 0.88
TSR1-201ENST00000301364 TPX2Q9ULW0 747 aaKnown RBP20.57■□□□□ 0.88
TSR1-201ENST00000301364 GPR75-ASB3A0A0A6YYF3 556 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 SPECC1L-ADORA2AF8WAN1 911 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 ITIH2P19823 946 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 TNFAIP2Q03169 654 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 THOC1Q96FV9 657 aaKnown RBP20.56■□□□□ 0.88
TSR1-201ENST00000301364 TRAIPQ9BWF2 469 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 PPARGC1AQ9UBK2 798 aaKnown RBP20.56■□□□□ 0.88
TSR1-201ENST00000301364 CDO1Q16878 200 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 SWSAP1Q6NVH7 229 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 RAB44Q7Z6P3 723 aaPredicted RBP20.56■□□□□ 0.88
TSR1-201ENST00000301364 SIX6OS1Q8N1H7 587 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 ETNK1Q9HBU6 452 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 HAUS5O94927 633 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 CASP7P55210 303 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 LRRC14Q15048 493 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 HSPBP1Q9NZL4 362 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 NDUFB10O96000 172 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 HHIPL2Q6UWX4 724 aa20.56■□□□□ 0.88
TSR1-201ENST00000301364 PSPC1Q8WXF1 523 aaKnown RBP20.56■□□□□ 0.88
TSR1-201ENST00000301364 MROH1Q8NDA8 1641 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 PDIA2Q13087 525 aaKnown RBP20.55■□□□□ 0.88
TSR1-201ENST00000301364 NT5DC1Q5TFE4 455 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 SNRNP48Q6IEG0 339 aaKnown RBP20.55■□□□□ 0.88
TSR1-201ENST00000301364 TRIM51Q9BSJ1 452 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 MYBP10242 640 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 FGFR4P22455 802 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 CNGA1P29973 690 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 DPY19L2Q6NUT2 758 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 BBS5Q8N3I7 341 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 C2orf40Q9H1Z8 148 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 ZNF302Q9NR11 478 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 SMARCAL1Q9NZC9 954 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 TMEM131LA2VDJ0 1609 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 GOLGA8CPA6NN73 597 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 C21orf2O43822 256 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 YWHABP31946 246 aaKnown RBP20.55■□□□□ 0.88
TSR1-201ENST00000301364 ZBED8Q8IZ13 594 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 AGO2Q9UKV8 859 aaKnown RBP20.55■□□□□ 0.88
TSR1-201ENST00000301364 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 CDH16O75309 829 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 PPP6R3Q5H9R7 873 aaPredicted RBP20.55■□□□□ 0.88
TSR1-201ENST00000301364 JADE1Q6IE81 842 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 TTC39CQ8N584 583 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 POLR3FQ9H1D9 316 aaPredicted RBP20.55■□□□□ 0.88
TSR1-201ENST00000301364 ECT2Q9H8V3 914 aa20.55■□□□□ 0.88
TSR1-201ENST00000301364 RBAKQ9NYW8 714 aaPredicted RBP20.55■□□□□ 0.88
TSR1-201ENST00000301364 NCF2P19878 526 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms