RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PRMT1Q99873 361 aaKnown RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SLC9A2Q9UBY0 812 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DPYSL4O14531 572 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HSPA8P11142 646 aaKnown RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KCNA4P22459 653 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TNFAIP2Q03169 654 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TMEM62Q0P6H9 643 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RCSD1Q6JBY9 416 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 OR6P1Q8NGX9 317 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TMEM247A6NEH6 219 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZC3H12BQ5HYM0 836 aaKnown RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 LRRC31Q6UY01 552 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PBXIP1Q96AQ6 731 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SH3KBP1Q96B97 665 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RBAKQ9NYW8 714 aaPredicted RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RGL1Q9NZL6 768 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 UTYO14607 1347 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TTC26A0AVF1 554 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CPB1P15086 417 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FMR1NBQ8N0W7 255 aaPredicted RBP14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TAGAPQ8N103 731 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PNMA3Q9UL41 463 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CALB1P05937 261 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RGS7P49802 495 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KRT17Q04695 432 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EMBQ6PCB8 327 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 URGCPQ8TCY9 931 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PIM2Q9P1W9 311 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ATP7BP35670 1465 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HAUS5O94927 633 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 BRAFP15056 766 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NUMBP49757 651 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 GRM4Q14833 912 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ARHGEF6Q15052 776 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CLEC10AQ8IUN9 316 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NDUFAF2Q8N183 169 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SMARCAL1Q9NZC9 954 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KPNA7A9QM74 516 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CHGBP05060 677 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 COPB2P35606 906 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CUL3Q13618 768 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DGKHQ86XP1 1220 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 C2orf69Q8N8R5 385 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ASIC4Q96FT7 647 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DACH2Q96NX9 599 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MXD3Q9BW11 206 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 IP6K2Q9UHH9 426 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KRT38O76015 456 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ARSEP51690 589 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PPP2R2AP63151 447 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MORF4L2Q15014 288 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FSCBQ5H9T9 825 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 IZUMO3Q5VZ72 239 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SLC26A7Q8TE54 656 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RPAP3Q9H6T3 665 aaPredicted RBP14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MROH7-TTC4A0A0A0MT08 1334 aa14.4□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ARHGEF37A1IGU5 675 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 IRF1P10914 325 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SULT1E1P49888 294 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CDH6P55285 790 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LZICQ8WZA0 190 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RMDN1Q96DB5 314 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 FAM205CA6NFA0 338 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SERPIND1P05546 499 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GRIK1P39086 918 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SH3BGRP55822 239 aaPredicted RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GUCY1A3Q02108 690 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 THEMIS2Q5TEJ8 643 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ZNF772Q68DY9 489 aaPredicted RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SHC4Q6S5L8 630 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SNF8Q96H20 258 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TSC22D3Q99576 134 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PIDD1Q9HB75 910 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TOPORSQ9NS56 1045 aaPredicted RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 HOXC10Q9NYD6 342 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AMACRQ9UHK6 382 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ADAM21Q9UKJ8 722 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 DIS3Q9Y2L1 958 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GTPBP10A4D1E9 387 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CYP27B1O15528 508 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 QARSP47897 775 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PRAMEP78395 509 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NOP53Q9NZM5 478 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TRIM10Q9UDY6 481 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 COL15A1P39059 1388 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CCDC188H7C350 402 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SCARF1Q14162 830 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KLHL38Q2WGJ6 581 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 FASTKD5Q7L8L6 764 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NLRP14Q86W24 1093 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NSUN6Q8TEA1 469 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 DPF2Q92785 391 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 UNC45AQ9H3U1 944 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RNF103-CHMP3A0A140T963 221 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AKR1B1P15121 316 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 UBE3AQ05086 875 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms