RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 SP4Q02446 784 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 BTG3Q14201 252 aaPredicted RBP11.78□□□□□ -0.52
VWA3A-201ENST00000299840 FAM47CQ5HY64 1035 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 CCDC183Q5T5S1 534 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 GDF6Q6KF10 455 aaPredicted RBP11.78□□□□□ -0.52
VWA3A-201ENST00000299840 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 CTNNBL1Q8WYA6 563 aaPredicted RBP11.78□□□□□ -0.52
VWA3A-201ENST00000299840 CLIC6Q96NY7 704 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 TRMT13Q9NUP7 481 aaKnown RBP11.78□□□□□ -0.52
VWA3A-201ENST00000299840 TCEAL9Q9UHQ7 104 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 MAP2K7O14733 419 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.53
VWA3A-201ENST00000299840 GAS7O60861 476 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 ABL1P00519 1130 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 SMIM10L2AP0DMW4 78 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 SMIM10L2BP0DMW5 78 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 ALOX15P16050 662 aaPredicted RBP11.77□□□□□ -0.53
VWA3A-201ENST00000299840 STAT5BP51692 787 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 JAK3P52333 1124 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 ADAM17P78536 824 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 KCNA1Q09470 495 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 TSR1Q2NL82 804 aaKnown RBP11.77□□□□□ -0.53
VWA3A-201ENST00000299840 FAM160B1Q5W0V3 765 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 DDX12PQ92771 950 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.53
VWA3A-201ENST00000299840 AZI2Q9H6S1 392 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
VWA3A-201ENST00000299840 PCDHA10Q9Y5I2 948 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 SCN5AQ14524 2016 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 DYTNA2CJ06 578 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 WDR64B1ANS9 1081 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 KIF28PB7ZC32 967 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 PSAPP07602 524 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 RCN1Q15293 331 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 SNCBQ16143 134 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 PTGISQ16647 500 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 SKIDA1Q1XH10 827 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 NANOGNBQ7Z5D8 188 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 TRIM50Q86XT4 487 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 SLFN12Q8IYM2 578 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 GALNT15Q8N3T1 639 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 HAS1Q92839 578 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 SLC39A3Q9BRY0 314 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 OSBPL10Q9BXB5 764 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 PDE11AQ9HCR9 933 aa11.77□□□□□ -0.53
VWA3A-201ENST00000299840 PRDM5Q9NQX1 630 aaPredicted RBP11.77□□□□□ -0.53
VWA3A-201ENST00000299840 MAFBQ9Y5Q3 323 aaPredicted RBP11.77□□□□□ -0.53
VWA3A-201ENST00000299840 NRCAMQ92823 1304 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 A0A1B0GVG6 124 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 A0A1W2PPC1 479 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
VWA3A-201ENST00000299840 RAG1P15918 1043 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 ITGB8P26012 769 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
VWA3A-201ENST00000299840 PPP2R5CQ13362 524 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 HIC1Q14526 733 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 MFSD5Q6N075 450 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 DNAH12Q6ZR08 3092 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 BRAPQ7Z569 592 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 CAGE1Q8TC20 777 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 GLG1Q92896 1179 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 LBHD1Q9BQE6 289 aaPredicted RBP11.76□□□□□ -0.53
VWA3A-201ENST00000299840 ZCWPW1Q9H0M4 648 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 MYH15Q9Y2K3 1946 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 PDCP20941 246 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 SLC8A1P32418 973 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 CCT5P48643 541 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 SMTNP53814 917 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 PLCB4Q15147 1175 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 TRIM71Q2Q1W2 868 aaKnown RBP11.76□□□□□ -0.53
VWA3A-201ENST00000299840 CCDC60Q8IWA6 550 aaPredicted RBP11.76□□□□□ -0.53
VWA3A-201ENST00000299840 CCDC155Q8N6L0 562 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 BADQ92934 168 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 VAV3Q9UKW4 847 aa11.76□□□□□ -0.53
VWA3A-201ENST00000299840 ATXN2Q99700 1313 aaKnown RBP11.75□□□□□ -0.53
VWA3A-201ENST00000299840 IGSF9BQ9UPX0 1349 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 COL1A2P08123 1366 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 GOLGA6L9A6NEM1 432 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 RRN3P2A6NIE6 340 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 EFCAB8A8MWE9 144 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 BFSP2Q13515 415 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 BZW1Q7L1Q6 419 aaKnown RBP11.75□□□□□ -0.53
VWA3A-201ENST00000299840 SERINC5Q86VE9 423 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 CACTINQ8WUQ7 758 aaKnown RBP11.75□□□□□ -0.53
VWA3A-201ENST00000299840 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 SH3GL1Q99961 368 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 HIPK3Q9H422 1215 aa11.75□□□□□ -0.53
VWA3A-201ENST00000299840 ZNHIT6Q9NWK9 470 aaKnown RBP11.75□□□□□ -0.53
VWA3A-201ENST00000299840 TRMT1Q9NXH9 659 aaKnown RBP11.75□□□□□ -0.53
VWA3A-201ENST00000299840 SEL1LQ9UBV2 794 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms