RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CLEC10AQ8IUN9 316 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 PDCD7Q8N8D1 485 aaKnown RBP15.92■□□□□ 0.14
SPIDR-201ENST00000297423 PIGOQ8TEQ8 1089 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 FLT1P17948 1338 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 A0A1B0GVG6 124 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 C5orf60A6NFR6 353 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 LINGO3P0C6S8 592 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 CPA2P48052 419 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 CDK8P49336 464 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 CASP4P49662 377 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 TRAF1Q13077 416 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 CTTNQ14247 550 aaKnown RBP15.92■□□□□ 0.14
SPIDR-201ENST00000297423 POTEGQ6S5H5 508 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 ZNF317Q96PQ6 595 aaPredicted RBP15.92■□□□□ 0.14
SPIDR-201ENST00000297423 USTQ9Y2C2 406 aa15.92■□□□□ 0.14
SPIDR-201ENST00000297423 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.92■□□□□ 0.14
SPIDR-201ENST00000297423 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.92■□□□□ 0.14
SPIDR-201ENST00000297423 PVALEFA0A1B0GWK0 134 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 LAD1O00515 517 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 CA4P22748 312 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 ATP5DP30049 168 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 IL9RQ01113 521 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 OVGP1Q12889 678 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 THAP2Q9H0W7 228 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 PASKQ96RG2 1323 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 CYTH3O43739 400 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 MARCKSL1P49006 195 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 TCP10Q12799 353 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 BLMHQ13867 455 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 MDH1BQ5I0G3 518 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 EXOC3L1Q86VI1 746 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 SPOCK2Q92563 424 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 FAM163AQ96GL9 167 aaPredicted RBP15.91■□□□□ 0.14
SPIDR-201ENST00000297423 IKZF4Q9H2S9 585 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 DNAJC12Q9UKB3 198 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 PFDN1O60925 122 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 PIAS1O75925 651 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 GNA14O95837 355 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 FERP16591 822 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 ABL2P42684 1182 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 CRKP46108 304 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 NT5C2P49902 561 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 CUL3Q13618 768 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 DRAP1Q14919 205 aaPredicted RBP15.91■□□□□ 0.14
SPIDR-201ENST00000297423 ASTE1Q2TB18 679 aaPredicted RBP15.91■□□□□ 0.14
SPIDR-201ENST00000297423 ARHGEF18Q6ZSZ5 1173 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 ZNF365Q70YC5 407 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 CFAP61Q8NHU2 1237 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 TTC1Q99614 292 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 STK17AQ9UEE5 414 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 SLC12A4Q9UP95 1085 aa15.91■□□□□ 0.14
SPIDR-201ENST00000297423 ZNF268Q14587 947 aaPredicted RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 SGO2Q562F6 1265 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 PPP1R15BQ5SWA1 713 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 STRIP1Q5VSL9 837 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 EPM2AIP1Q7L775 607 aaPredicted RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 ATG4AQ8WYN0 398 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 PDGFDQ9GZP0 370 aaPredicted RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 MYLK2Q9H1R3 596 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 SLCO1B3Q9NPD5 702 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 RHBDL2Q9NX52 303 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 BZW2Q9Y6E2 419 aaKnown RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 NVLO15381 856 aaKnown RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 ECEL1O95672 775 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 ETS2P15036 469 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 TUBP50607 506 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 HS2ST1Q7LGA3 356 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 NT5DC3Q86UY8 548 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 SFR1Q86XK3 245 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 RTKN2Q8IZC4 609 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 OGFOD1Q8N543 542 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 HIPK4Q8NE63 616 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 UCMAQ8WVF2 138 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.9■□□□□ 0.147e-7■■■■■ 70.8
SPIDR-201ENST00000297423 KRT35Q92764 455 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 PNMA5Q96PV4 448 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 MMTAG2Q9BU76 263 aaKnown RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 TTC7AQ9ULT0 858 aaPredicted RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 GOLGA8RI6L899 631 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 MAPK7Q13164 816 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 AUHQ13825 339 aaKnown RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 MYCT1Q8N699 235 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 ATXN2LQ8WWM7 1075 aaKnown RBP15.9■□□□□ 0.14
SPIDR-201ENST00000297423 NPHS2Q9NP85 383 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 ALG6Q9Y672 507 aa15.9■□□□□ 0.14
SPIDR-201ENST00000297423 MAPK13O15264 365 aa15.89■□□□□ 0.13
SPIDR-201ENST00000297423 SKIP12755 728 aa15.89■□□□□ 0.13
SPIDR-201ENST00000297423 PRPHP41219 470 aa15.89■□□□□ 0.13
SPIDR-201ENST00000297423 MMP13P45452 471 aa15.89■□□□□ 0.13
SPIDR-201ENST00000297423 RCN1Q15293 331 aa15.89■□□□□ 0.13
SPIDR-201ENST00000297423 CDC42EP4Q9H3Q1 356 aaKnown RBP15.89■□□□□ 0.13
SPIDR-201ENST00000297423 UBN1Q9NPG3 1134 aa15.89■□□□□ 0.13
SPIDR-201ENST00000297423 PARP2Q9UGN5 583 aa15.89■□□□□ 0.13
SPIDR-201ENST00000297423 DDX3XO00571 662 aaKnown RBP eCLIP15.89■□□□□ 0.13
SPIDR-201ENST00000297423 FAM13AO94988 1023 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms