RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 CTCFP49711 727 aaPredicted RBP13.43□□□□□ -0.26
CAGE1-201ENST00000296742 LRRC14Q15048 493 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 HYIQ5T013 277 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 PEX26Q7Z412 305 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 AGBL3Q8NEM8 1001 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 DYDC1Q8WWB3 177 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 ADAM7Q9H2U9 754 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 ZFATQ9P243 1243 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 PCDHA2Q9Y5H9 948 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 GOLGA6L10A0A0M3HER8 536 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 CCDC188H7C350 402 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 NEFHP12036 1026 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 RPA1P27694 616 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 COPB2P35606 906 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 MSH2P43246 934 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 MMP13P45452 471 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 LACTBP83111 547 aaPredicted RBP13.43□□□□□ -0.26
CAGE1-201ENST00000296742 ATP11AP98196 1134 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 PRPF4BQ13523 1007 aaKnown RBP13.43□□□□□ -0.26
CAGE1-201ENST00000296742 GIT2Q14161 759 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 CCDC38Q502W7 563 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 DENND2CQ68D51 928 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 CHURC1Q8WUH1 139 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 DYDC2Q96IM9 177 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 FAM114A2Q9NRY5 505 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
CAGE1-201ENST00000296742 SMIM24O75264 130 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 LUC7L3O95232 432 aaKnown RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 ATP4AP20648 1035 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 ASIC2Q16515 512 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 IFI16Q16666 785 aaKnown RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 NEK9Q8TD19 979 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 NAP1L4Q99733 375 aaKnown RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 TSG101Q99816 390 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 PLCD4Q9BRC7 762 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 EDEM3Q9BZQ6 932 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 NUCKS1Q9H1E3 243 aaKnown RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 WRAP73Q9P2S5 460 aaPredicted RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 PNMA3Q9UL41 463 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 ALAS1P13196 640 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 RAB27AP51159 221 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 PLTPP55058 493 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 IL31RAQ8NI17 732 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 ERMNQ8TAM6 284 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 NAF1Q96HR8 494 aaKnown RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 LRRC27Q9C0I9 530 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 RANBP17Q9H2T7 1088 aaKnown RBP13.42□□□□□ -0.26
CAGE1-201ENST00000296742 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 ADAM22Q9P0K1 906 aa13.42□□□□□ -0.26
CAGE1-201ENST00000296742 CCDC169A6NNP5 214 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 CLIC2O15247 247 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 SNX3O60493 162 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 ASNSP08243 561 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 PRELPP51888 382 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 COPS2P61201 443 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 FKBP3Q00688 224 aaKnown RBP13.41□□□□□ -0.26
CAGE1-201ENST00000296742 ADAM9Q13443 819 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 PRKG1Q13976 671 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 ZCWPW2Q504Y3 356 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 NBPF12Q5TAG4 269 aaPredicted RBP13.41□□□□□ -0.26
CAGE1-201ENST00000296742 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 OTOP1Q7RTM1 612 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 FGFR1OP2Q9NVK5 253 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 DPPA5A6NC42 116 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 CES2O00748 559 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 GAS7O60861 476 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 PPFIA2O75334 1257 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 PDHA1P08559 390 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 GNAT1P11488 350 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 GMPSP49915 693 aaPredicted RBP13.41□□□□□ -0.26
CAGE1-201ENST00000296742 PTK2Q05397 1052 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 PSMD2Q13200 908 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 SLC29A2Q14542 456 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
CAGE1-201ENST00000296742 FAM20AQ96MK3 541 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 MLXIPLQ9NP71 852 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 NR2E1Q9Y466 385 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 COL4A3BPQ9Y5P4 624 aa13.41□□□□□ -0.26
CAGE1-201ENST00000296742 SLITRK3O94933 977 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 FGGP02679 453 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 CIITAP33076 1130 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 HOXD13P35453 343 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 EPS15P42566 896 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 PAPOLAP51003 745 aaKnown RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 PDE6CP51160 858 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 RPS6KA3P51812 740 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 PMS2P54278 862 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 MTMR2Q13614 643 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 PLS1Q14651 629 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 ZC2HC1CQ53FD0 456 aaPredicted RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 MOXD1Q6UVY6 613 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms