RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TRIM42Q8IWZ5 723 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 LRRC8CQ8TDW0 803 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 OPTNQ96CV9 577 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 EHD2Q9NZN4 543 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 IL18RAPO95256 599 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 TCF7P36402 384 aaPredicted RBP18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 NOP9Q86U38 636 aaKnown RBP18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 NEURL4Q96JN8 1562 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 C17orf102A2RUQ5 167 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 CDK17Q00537 523 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 DR1Q01658 176 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 TMEM62Q0P6H9 643 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 FAM102AQ5T9C2 384 aaPredicted RBP18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 PLA2G4FQ68DD2 849 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 ACOT2P49753 483 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 KRT33BQ14525 404 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 ATF7IP2Q5U623 682 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 PCGF5Q86SE9 256 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 GMCL1P1Q8NEA9 526 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 DDTLA6NHG4 134 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 PAMP19021 973 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 NPHP3-ACAD11A0A0J9YXS1 232 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 TAP1Q03518 808 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 CENPUQ71F23 418 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 VCAM1P19320 739 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 DDR1Q08345 913 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 PCSK9Q8NBP7 692 aaKnown RBP18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 FAM71BQ8TC56 605 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 DCDC2CA8MYV0 355 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 FGGP02679 453 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 CA4P22748 312 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 SNRPFP62306 86 aaKnown RBP18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 RBBP5Q15291 538 aaKnown RBP18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 SGSM1Q2NKQ1 1148 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 LMBRD2Q68DH5 695 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 ZNF564Q8TBZ8 553 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 MID2Q9UJV3 735 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 ATP8A1Q9Y2Q0 1164 aa18.87■□□□□ 0.61
CDC42EP3-201ENST00000295324 CREB3O43889 395 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 GRIK1P39086 918 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 ACTR2P61160 394 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 FAM117BQ6P1L5 589 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 NOTUMQ6P988 496 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 SENP2Q9HC62 589 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 IRAK4Q9NWZ3 460 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 SKIP12755 728 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 TRIP13Q15645 432 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 DAGLBQ8NCG7 672 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 HVCN1Q96D96 273 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 PXDNQ92626 1479 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 MOCS2O96007 188 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 RPLP2P05387 115 aaKnown RBP18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 SOX5P35711 763 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 LRRC71Q8N4P6 559 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 FAF2Q96CS3 445 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 HINFPQ9BQA5 517 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 A0A1W2PQC6 194 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 FTLP02792 175 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 ARHGAP25P42331 645 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 IL9RQ01113 521 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 POLR3CQ9BUI4 534 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 RABEP2Q9H5N1 569 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 C17orf75Q9HAS0 396 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 MED4Q9NPJ6 270 aa18.86■□□□□ 0.61
CDC42EP3-201ENST00000295324 ANKRD40Q6AI12 368 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 USP50Q70EL3 339 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 CACNA2D3Q8IZS8 1091 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 IFT43Q96FT9 208 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 FSD1LQ9BXM9 530 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 CYP26B1Q9NR63 512 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 MOSPD1Q9UJG1 213 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 HEY1Q9Y5J3 304 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 GOLGA8QA0A0J9YX86 632 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 GOLGA8OA6NCC3 632 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 GOLGA8NF8WBI6 632 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 SPDYE1Q8NFV5 336 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 SPON2Q9BUD6 331 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 NUP85Q9BW27 656 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 PCSK1NQ9UHG2 260 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 PODXLO00592 558 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 MT-ND3P03897 115 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 STAG3L1P0CL83 205 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 FKBP1AP62942 108 aaKnown RBP18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 SNRNP35Q16560 246 aaKnown RBP18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 RAB3IPQ96QF0 476 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 VCXQ9H320 206 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 PITPNM2Q9BZ72 1349 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 DCLK2Q8N568 766 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 PYROXD1Q8WU10 500 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 WNT10BO00744 389 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 CYBBP04839 570 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 DHX9Q08211 1270 aaKnown RBP18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 NCOA4Q13772 614 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 DCP1BQ8IZD4 617 aaKnown RBP18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 MORC4Q8TE76 937 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 EFCC1Q9HA90 598 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms