RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PICALMQ13492 652 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
LMX1A-201ENST00000294816 CYP4F22Q6NT55 531 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 CYP4X1Q8N118 509 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SPOCK2Q92563 424 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 LRRC37BQ96QE4 947 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 RUSC1Q9BVN2 902 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 BTG4Q9NY30 223 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 COL4A1P02462 1669 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 CLDN3O15551 220 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 MAP3K13O43283 966 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 AHCYL1O43865 530 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 CBX6O95503 412 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 TTLL1O95922 423 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 NMT1P30419 496 aaKnown RBP11□□□□□ -0.65
LMX1A-201ENST00000294816 BTDP43251 543 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 KLC1Q07866 573 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 ZC2HC1CQ53FD0 456 aaPredicted RBP11□□□□□ -0.65
LMX1A-201ENST00000294816 CGB2Q6NT52 195 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 TRMT10CQ7L0Y3 403 aaKnown RBP11□□□□□ -0.65
LMX1A-201ENST00000294816 PRUNE1Q86TP1 453 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 KIAA0825Q8IV33 1275 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 MYCT1Q8N699 235 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 FAM13CQ8NE31 585 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SUPT20HQ8NEM7 779 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SLC30A5Q8TAD4 765 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 STK32AQ8WU08 396 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 DNAJC9Q8WXX5 260 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 ATG4AQ8WYN0 398 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 ART4Q93070 314 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 C9orf72Q96LT7 481 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SERPINB12Q96P63 405 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 TRIM4Q9C037 500 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 KIAA1683Q9H0B3 1180 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 NENFQ9UMX5 172 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 C2CD2Q9Y426 696 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 MIF4GDA9UHW6 222 aaKnown RBP11□□□□□ -0.65
LMX1A-201ENST00000294816 PEX11AO75192 247 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 FAM13AO94988 1023 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 FOXN2P32314 431 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 RAB27AP51159 221 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SLC12A3P55017 1021 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 IL9RQ01113 521 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 COG2Q14746 738 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 CLUL1Q15846 466 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SGO2Q562F6 1265 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 MFSD5Q6N075 450 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 KCTD1Q719H9 257 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SLC51AQ86UW1 340 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 CATSPER3Q86XQ3 398 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SYT15Q9BQS2 421 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 TMEM109Q9BVC6 243 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 INTS2Q9H0H0 1204 aaKnown RBP11□□□□□ -0.65
LMX1A-201ENST00000294816 RIOX1Q9H6W3 641 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11□□□□□ -0.65
LMX1A-201ENST00000294816 CYP39A1Q9NYL5 469 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 PAPPAQ13219 1627 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 ASTN1O14525 1302 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 TAF1P21675 1872 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 RASA4BC9J798 803 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 FOXN3O00409 490 aaPredicted RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 RASA4O43374 803 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 PSMC2P35998 433 aaKnown RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 ADCY8P40145 1251 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 FMO5P49326 533 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 PEX5P50542 639 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 MRPS35P82673 323 aaKnown RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 MYL7Q01449 175 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 CBWD6Q4V339 395 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 CBWD3Q5JTY5 395 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 CBWD5Q5RIA9 395 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 RNF220Q5VTB9 566 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 EPM2AIP1Q7L775 607 aaPredicted RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 SLC13A5Q86YT5 568 aaPredicted RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 RHOT2Q8IXI1 618 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 ERMNQ8TAM6 284 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 FAM118BQ9BPY3 351 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 SLCO1B3Q9NPD5 702 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 PCYOX1Q9UHG3 505 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 USP17L10C9JJH3 530 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 LGR5O75473 907 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 FESP07332 822 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 ALDH3A1P30838 453 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 PTDSS1P48651 473 aaKnown RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 MTFR1Q15390 333 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 HP1BP3Q5SSJ5 553 aaPredicted RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 MIGA2Q7L4E1 593 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 APBB1IPQ7Z5R6 666 aaPredicted RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 RPUSD2Q8IZ73 545 aaKnown RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 AGGF1Q8N302 714 aaeCLIP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 MAGEB18Q96M61 343 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 AGPAT1Q99943 283 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 MOV10L1Q9BXT6 1211 aaKnown RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 UBE2TQ9NPD8 197 aaPredicted RBP10.99□□□□□ -0.65
LMX1A-201ENST00000294816 POC1B-GALNT4F8VUJ3 575 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 MAPK13O15264 365 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 TPBGLP0DKB5 382 aa10.99□□□□□ -0.65
LMX1A-201ENST00000294816 TAC1P20366 129 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms