RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ZMYND15Q9H091 742 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 SYNCQ9H7C4 482 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 CCDC169A6NNP5 214 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 CTNNA2P26232 953 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 IGBP1P78318 339 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 MRPS6P82932 125 aaKnown RBP9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 RUFY4Q6ZNE9 571 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 HS2ST1Q7LGA3 356 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 METTL13Q8N6R0 699 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 MRPL4Q9BYD3 311 aaKnown RBP9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 GCOM2Q9BZD3 368 aaPredicted RBP9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 GRPEL1Q9HAV7 217 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 IFT122Q9HBG6 1241 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 KIAA1586Q9HCI6 787 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 AKT3Q9Y243 479 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 TRPV2Q9Y5S1 764 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 SFI1A8K8P3 1242 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 PROZP22891 400 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 PPP2R3AQ06190 1150 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 HIC1Q14526 733 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 LRRC55Q6ZSA7 311 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 TSHZ1Q6ZSZ6 1077 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 RHPN2Q8IUC4 686 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 LRRC71Q8N4P6 559 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 HPS3Q969F9 1004 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 DEFB118Q96PH6 123 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 DUSP9Q99956 384 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 DMAC2Q9NW81 257 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 ACKR2O00590 384 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 CLCN3P51790 818 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 IRX5P78411 483 aaPredicted RBP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 FKBP3Q00688 224 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 BIRC2Q13490 618 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 MTFR1Q15390 333 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 PTGISQ16647 500 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 TRIM71Q2Q1W2 868 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 CCDC40Q4G0X9 1142 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 ANKRD40Q6AI12 368 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 SMYD5Q6GMV2 418 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 ANKRD33Q7Z3H0 272 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 U2AF1L4Q8WU68 220 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 TOX2Q96NM4 488 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 MED15Q96RN5 788 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 DNAI2Q9GZS0 605 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 HSD3B7Q9H2F3 369 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 SUGCTQ9HAC7 445 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 LIMA1Q9UHB6 759 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 KAT6AQ92794 2004 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 M0QZ92 97 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 TGFB1I1O43294 461 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 SFPQP23246 707 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 AGPAT3Q9NRZ7 376 aa9.2□□□□□ -0.94
PTPDC1-201ENST00000288976 LRRIQ4A6NIV6 560 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 TREHO43280 583 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 PRPF6O94906 941 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 PARNO95453 639 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 PRKCBP05771 671 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 CDC25BP30305 580 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 SOX10P56693 466 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 DRP2Q13474 957 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 SEPT7Q16181 437 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 MAPK6Q16659 721 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 FRMD5Q7Z6J6 570 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 USP38Q8NB14 1042 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 RNF149Q8NC42 400 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 SH2D3AQ9BRG2 576 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 SENP6Q9GZR1 1112 aaPredicted RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 LUC7LQ9NQ29 371 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 TNFSF13BQ9Y275 285 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 NFE2L3Q9Y4A8 694 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 CBFA2T2O43439 604 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 CD4P01730 458 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 NR3C1P04150 777 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 AMHR2Q16671 573 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 ZC2HC1CQ53FD0 456 aaPredicted RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 CSGALNACT2Q8N6G5 542 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 GLIS3Q8NEA6 775 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 TSPAN18Q96SJ8 248 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 TRIM6Q9C030 488 aaPredicted RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 METTL14Q9HCE5 456 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 K7ERI5 159 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 N4BP3O15049 544 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 TLR3O15455 904 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 LDHAP00338 332 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 PMS1P54277 932 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 DCAF4L1Q3SXM0 396 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 LUZP1Q86V48 1076 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 DARSP14868 501 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 MCL1Q07820 350 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 FBXL18Q96ME1 805 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 ACO2Q99798 780 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 CELF4Q9BZC1 486 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 MCOLN1Q9GZU1 580 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 PTPRHQ9HD43 1115 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 CHST12Q9NRB3 414 aa9.19□□□□□ -0.94
PTPDC1-201ENST00000288976 LRRC10BA6NIK2 292 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 CETN3O15182 167 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms