RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 TMC5Q6UXY8 1006 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 NSUN7Q8NE18 718 aaKnown RBP15.6■□□□□ 0.09
TPM1-202ENST00000288398 BCL7CQ8WUZ0 217 aaPredicted RBP15.6■□□□□ 0.09
TPM1-202ENST00000288398 CPB2Q96IY4 423 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 CSRNP2Q9H175 543 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 IPPQ9Y573 584 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 ARL5CA6NH57 179 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 NRP1O14786 923 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 USO1O60763 962 aaKnown RBP15.59■□□□□ 0.09
TPM1-202ENST00000288398 DDHD2O94830 711 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 ADH1AP07327 375 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 FDPSP14324 419 aaKnown RBP15.59■□□□□ 0.09
TPM1-202ENST00000288398 MLH1P40692 756 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 POU5F1BQ06416 359 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 UBXN11Q5T124 520 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 CCDC149Q6ZUS6 474 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 ZBTB8OSQ8IWT0 167 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 ERMNQ8TAM6 284 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 TNFRSF25Q93038 417 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 GAD1Q99259 594 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 IRF2BPLQ9H1B7 796 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 POLR3FQ9H1D9 316 aaPredicted RBP15.59■□□□□ 0.09
TPM1-202ENST00000288398 CDH22Q9UJ99 828 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 PIEZO1Q92508 2521 aa15.59■□□□□ 0.09
TPM1-202ENST00000288398 TECTAO75443 2155 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 LRRIQ4A6NIV6 560 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 JAK2O60674 1132 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 LARGE1O95461 756 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 SOD2P04179 222 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 MCM7P33993 719 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 GLUD2P49448 558 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 CAPSQ13938 189 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 OTOP3Q7RTS5 596 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 ZDHHC14Q8IZN3 488 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 SMG8Q8ND04 991 aaKnown RBP15.58■□□□□ 0.08
TPM1-202ENST00000288398 MCPH1Q8NEM0 835 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 ASAP3Q8TDY4 903 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 PIGOQ8TEQ8 1089 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 SLC22A17Q8WUG5 538 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 KLHL5Q96PQ7 755 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 RPS6KC1Q96S38 1066 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 HSD17B14Q9BPX1 270 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 HERC2P3Q9BVR0 1158 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 COLEC11Q9BWP8 271 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 EIF2AQ9BY44 585 aaKnown RBP15.58■□□□□ 0.08
TPM1-202ENST00000288398 MFSD1Q9H3U5 465 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 XPNPEP1Q9NQW7 623 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 USTQ9Y2C2 406 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 GIT1Q9Y2X7 761 aa15.58■□□□□ 0.08
TPM1-202ENST00000288398 CNPP09543 421 aaKnown RBP15.57■□□□□ 0.08
TPM1-202ENST00000288398 XRCC6P12956 609 aaKnown RBP eCLIP15.57■□□□□ 0.08
TPM1-202ENST00000288398 RARRES1P49788 294 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 SCNN1GP51170 649 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 CLCN4P51793 760 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 MBTD1Q05BQ5 628 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 ERICH6BQ5W0A0 696 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 SLC27A1Q6PCB7 646 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 MAEAQ7L5Y9 396 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 IFNLR1Q8IU57 520 aaPredicted RBP15.57■□□□□ 0.08
TPM1-202ENST00000288398 ASIC4Q96FT7 647 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 C8orf76Q96K31 380 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 NFKBIZQ9BYH8 718 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 TUFT1Q9NNX1 390 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 PARP2Q9UGN5 583 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 HES2Q9Y543 173 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 TRIOO75962 3097 aa15.57■□□□□ 0.08
TPM1-202ENST00000288398 POTEMA6NI47 508 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 B4GALT3O60512 393 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 NPTXRO95502 500 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 GLUD1P00367 558 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 ARF4P18085 180 aaPredicted RBP15.56■□□□□ 0.08
TPM1-202ENST00000288398 GLRA2P23416 452 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 AVPR2P30518 371 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 ARL2P36404 184 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 AFF1P51825 1210 aaKnown RBP15.56■□□□□ 0.08
TPM1-202ENST00000288398 GUCY1B3Q02153 619 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 IER5LQ5T953 404 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 KANK3Q6NY19 840 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 GPR149Q86SP6 731 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 COLGALT2Q8IYK4 626 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 FAM184AQ8NB25 1140 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 PRSS33Q8NF86 280 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 STAMQ92783 540 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 ZFP42Q96MM3 310 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 VN1R3Q9BXE9 311 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 C2orf40Q9H1Z8 148 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 NXF3Q9H4D5 531 aaKnown RBP15.56■□□□□ 0.08
TPM1-202ENST00000288398 PRMT7Q9NVM4 692 aaPredicted RBP15.56■□□□□ 0.08
TPM1-202ENST00000288398 LIMD1Q9UGP4 676 aa15.56■□□□□ 0.08
TPM1-202ENST00000288398 ARID2Q68CP9 1835 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 ARHGEF35A5YM69 484 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 ASGR2P07307 311 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 AKAP5P24588 427 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 CREMQ03060 361 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 GRIK3Q13003 919 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 HAUS3Q68CZ6 603 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 C15orf39Q6ZRI6 1047 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 DEPTORQ8TB45 409 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 PRIMPOLQ96LW4 560 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms