RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 BMP2KQ9NSY1 1161 aaPredicted RBP16.92■□□□□ 0.3
PDE6D-201ENST00000287600 MEIS3P2A8K0S8 358 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 MED24O75448 989 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 PRPHP41219 470 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 NUBP1P53384 320 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 PTPN5P54829 565 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 ATP2C1P98194 919 aaPredicted RBP16.91■□□□□ 0.3
PDE6D-201ENST00000287600 PDIA5Q14554 519 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 IL17AQ16552 155 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 EXOC8Q8IYI6 725 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 SPRYD3Q8NCJ5 442 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 URGCPQ8TCY9 931 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 PIGOQ8TEQ8 1089 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 PSPC1Q8WXF1 523 aaKnown RBP16.91■□□□□ 0.3
PDE6D-201ENST00000287600 ASIC4Q96FT7 647 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 IGSF21Q96ID5 467 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 RIPOR3Q96MK2 946 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 CCDC43Q96MW1 224 aaKnown RBP16.91■□□□□ 0.3
PDE6D-201ENST00000287600 PRRX2Q99811 253 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 POLR3CQ9BUI4 534 aaPredicted RBP16.91■□□□□ 0.3
PDE6D-201ENST00000287600 RAB34Q9BZG1 259 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 NRDE2Q9H7Z3 1164 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 TUFT1Q9NNX1 390 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 ANKEF1Q9NU02 776 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 AGPAT5Q9NUQ2 364 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 DZANK1Q9NVP4 752 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 MTMR6Q9Y217 621 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 PPME1Q9Y570 386 aa16.91■□□□□ 0.3
PDE6D-201ENST00000287600 STX6O43752 255 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 OFD1O75665 1012 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 GABBR2O75899 941 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 CTSAP10619 480 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 CCT6AP40227 531 aaKnown RBP16.9■□□□□ 0.3
PDE6D-201ENST00000287600 RFC5P40937 340 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 MTHFRP42898 656 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 RESTQ13127 1097 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 GIT2Q14161 759 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 RARS2Q5T160 578 aaKnown RBP16.9■□□□□ 0.3
PDE6D-201ENST00000287600 IER5LQ5T953 404 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 HAUS3Q68CZ6 603 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 DDX53Q86TM3 631 aaKnown RBP16.9■□□□□ 0.3
PDE6D-201ENST00000287600 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 BCL7CQ8WUZ0 217 aaPredicted RBP16.9■□□□□ 0.3
PDE6D-201ENST00000287600 TMEM143Q96AN5 459 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 PHF12Q96QT6 1004 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 DHX33Q9H6R0 707 aaKnown RBP16.9■□□□□ 0.3
PDE6D-201ENST00000287600 IFT122Q9HBG6 1241 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 DNAJB4Q9UDY4 337 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 PCDHB2Q9Y5E7 798 aa16.9■□□□□ 0.3
PDE6D-201ENST00000287600 PIEZO1Q92508 2521 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 C2CD4DB7Z1M9 353 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 ZNF623O75123 536 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 GALTP07902 379 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 SRGAP2CP0DJJ0 459 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 XRCC6P12956 609 aaKnown RBP eCLIP16.89■□□□□ 0.29
PDE6D-201ENST00000287600 EPCAMP16422 314 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 RPA1P27694 616 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 SLC11A1P49279 550 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 MTMR3Q13615 1198 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 EMC2Q15006 297 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 POTEGQ6S5H5 508 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 TDRD5Q8NAT2 981 aaKnown RBP16.89■□□□□ 0.29
PDE6D-201ENST00000287600 KREMEN2Q8NCW0 462 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 PRPF31Q8WWY3 499 aaKnown RBP16.89■□□□□ 0.29
PDE6D-201ENST00000287600 NACC1Q96RE7 527 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 RSAD1Q9HA92 442 aa16.89■□□□□ 0.29
PDE6D-201ENST00000287600 VWA3AA6NCI4 1184 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 PP2D1A8MPX8 630 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 GAS2O43903 313 aaKnown RBP16.88■□□□□ 0.29
PDE6D-201ENST00000287600 RARRES1P49788 294 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 VCPP55072 806 aaKnown RBP16.88■□□□□ 0.29
PDE6D-201ENST00000287600 LAMTOR4Q0VGL1 99 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
PDE6D-201ENST00000287600 KRT79Q5XKE5 535 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 KIAA1841Q6NSI8 718 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 ZNF280BQ86YH2 543 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 C12orf76Q8N812 135 aaPredicted RBP16.88■□□□□ 0.29
PDE6D-201ENST00000287600 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 TCP11Q8WWU5 503 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 FAM193BQ96PV7 902 aaPredicted RBP16.88■□□□□ 0.29
PDE6D-201ENST00000287600 DBR1Q9UK59 544 aaKnown RBP16.88■□□□□ 0.29
PDE6D-201ENST00000287600 SORCS3Q9UPU3 1222 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 IRAK3Q9Y616 596 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 STK24Q9Y6E0 443 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 DENND4AQ7Z401 1863 aa16.88■□□□□ 0.29
PDE6D-201ENST00000287600 B4GALT3O60512 393 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 DGAT1O75907 488 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 ERLIN2O94905 339 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 BMP15O95972 392 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 SSBP05455 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDE6D-201ENST00000287600 CDC25AP30304 524 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 PTPN14Q15678 1187 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 ECM1Q16610 540 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 ATAT1Q5SQI0 421 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 ARL6IP4Q66PJ3 421 aaKnown RBP16.87■□□□□ 0.29
PDE6D-201ENST00000287600 AGMOQ6ZNB7 445 aa16.87■□□□□ 0.29
PDE6D-201ENST00000287600 CABP7Q86V35 215 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms