RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PRPF4BQ13523 1007 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 PCBP1Q15365 356 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 AMHR2Q16671 573 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 SLFN12LQ6IEE8 588 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 ANKLE1Q8NAG6 615 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 POMGNT1Q8WZA1 660 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 PCIF1Q9H4Z3 704 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 HSPBP1Q9NZL4 362 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 SLC16A3O15427 465 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 TOM1L1O75674 476 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 CAPN2P17655 700 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 THPOP40225 353 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 MARSP56192 900 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 SNX17Q15036 470 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 KRT31Q15323 416 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 CEP135Q66GS9 1140 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 TSHZ1Q6ZSZ6 1077 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 XXYLT1Q8NBI6 393 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 MKNK1Q9BUB5 465 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 INTS13Q9NVM9 706 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 FRMD4BQ9Y2L6 1034 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 CBFA2T2O43439 604 aa20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 EXOC3O60645 756 aa20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 PSMC2P35998 433 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 CASP4P49662 377 aa20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 DHX38Q92620 1227 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 TMEM106CQ9BVX2 250 aa20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 TRPV2Q9Y5S1 764 aa20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 CDY2AQ9Y6F7 541 aa20.66■□□□□ 0.9
PDLIM3-202ENST00000284770 CNTNAP2Q9UHC6 1331 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 A0A1B0GTH6 734 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 B4GALT5O43286 388 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 ERLIN2O94905 339 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 EPB41P11171 864 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 COL6A1P12109 1028 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 TRIM71Q2Q1W2 868 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 CCDC40Q4G0X9 1142 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 ATF7IP2Q5U623 682 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 FRMD5Q7Z6J6 570 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 TMEM40Q8WWA1 233 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 ZBTB45Q96K62 511 aaPredicted RBP20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 TNFSF13BQ9Y275 285 aa20.65■□□□□ 0.9
PDLIM3-202ENST00000284770 A0A0B4J269 797 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 KIAA0391O15091 583 aaKnown RBP20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 CLDN3O15551 220 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 TSPAN1O60635 241 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 CAND2O75155 1236 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 CHRNA1P02708 482 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 PROZP22891 400 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 MTIF2P46199 727 aaKnown RBP20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 MGAT3Q09327 533 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 FAM126BQ8IXS8 530 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 SPC24Q8NBT2 197 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 TUBGCP2Q9BSJ2 902 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 METTL14Q9HCE5 456 aaKnown RBP20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 PTPRHQ9HD43 1115 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 ANKFY1Q9P2R3 1169 aa20.64■□□□□ 0.9
PDLIM3-202ENST00000284770 MROH7Q68CQ1 1323 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 CTSHP09668 335 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 SFPQP23246 707 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 SLC39A5Q6ZMH5 540 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 DNAH12Q6ZR08 3092 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 CATSPER4Q7RTX7 472 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 FAM186BQ8IYM0 893 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 FBXL18Q96ME1 805 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 TCHPQ9BT92 498 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 HAPLN2Q9GZV7 340 aa20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 ARMCX3Q9UH62 379 aaPredicted RBP20.64■□□□□ 0.89
PDLIM3-202ENST00000284770 ABLIM1O14639 778 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 MAPK13O15264 365 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 CD4P01730 458 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 ARF4P18085 180 aaPredicted RBP20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 FGFR4P22455 802 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 MATR3P43243 847 aaKnown RBP eCLIP20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 COPB1P53618 953 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 MCL1Q07820 350 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 NCBP1Q09161 790 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 NR1I3Q14994 352 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 TMEM132AQ24JP5 1023 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 C1orf53Q5VUE5 145 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 MPZL3Q6UWV2 235 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 TRIM59Q8IWR1 403 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 GPD1LQ8N335 351 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 ZSWIM2Q8NEG5 633 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 DIS3LQ8TF46 1054 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 SAAL1Q96ER3 474 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 BORCS6Q96GS4 357 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 MSTO1Q9BUK6 570 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 TAB2Q9NYJ8 693 aa20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 AGO2Q9UKV8 859 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-202ENST00000284770 PRKCSHP14314 528 aaPredicted RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 FILIP1LQ4L180 1135 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 FAM26DQ5JW98 314 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 RDH13Q8NBN7 331 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 VPS16Q9H269 839 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 KIAA1586Q9HCI6 787 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 A0A1B0GUA9 196 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 GOLGA8IPA6NC78 632 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 GOLGA8JA6NMD2 632 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 EXTL3O43909 919 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms