RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
MRPS28-201ENST00000276585 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
MRPS28-201ENST00000276585 TMEM150BA6NC51 233 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
MRPS28-201ENST00000276585 FOSBP53539 338 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 SPIRE1Q08AE8 756 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 LPAL2Q16609 132 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 LRRC55Q6ZSA7 311 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 TRMT1LQ7Z2T5 733 aaKnown RBP13.79□□□□□ -0.2
MRPS28-201ENST00000276585 CKAP2LQ8IYA6 745 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 NME8Q8N427 588 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 RDM1Q8NG50 284 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 WASF1Q92558 559 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 SHDQ96IW2 340 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
MRPS28-201ENST00000276585 C9IYK1 514 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 GPR32O75388 356 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 VTNP04004 478 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 GCFC2P16383 781 aaKnown RBP13.78□□□□□ -0.2
MRPS28-201ENST00000276585 XBP1P17861 261 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 KRT2P35908 639 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 CLCN3P51790 818 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 IL31Q6EBC2 164 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 MIER3Q7Z3K6 550 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 CCDC83Q8IWF9 413 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 SLC39A11Q8N1S5 342 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 SLC22A17Q8WUG5 538 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 FAM167AQ96KS9 214 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 WRAP73Q9P2S5 460 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-201ENST00000276585 TCEAL9Q9UHQ7 104 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 LIMCH1Q9UPQ0 1083 aa13.78□□□□□ -0.2
MRPS28-201ENST00000276585 NOC2LQ9Y3T9 749 aaKnown RBP13.78□□□□□ -0.2
MRPS28-201ENST00000276585 C1QTNF9BB2RNN3 333 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 BTBD18B2RXH4 712 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 HOXA2O43364 376 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 CCNT1O60563 726 aaKnown RBP13.77□□□□□ -0.21
MRPS28-201ENST00000276585 LILRB5O75023 590 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 N4BP1O75113 896 aaKnown RBP13.77□□□□□ -0.21
MRPS28-201ENST00000276585 C1QTNF9P0C862 333 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 DRP2Q13474 957 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 ODR4Q5SWX8 454 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 UNQ6494/PRO21346Q6UXR6 183 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
MRPS28-201ENST00000276585 LRRC71Q8N4P6 559 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 STAMQ92783 540 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 TMEM169Q96HH4 297 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 PPP1R16BQ96T49 567 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 ADAMTS10Q9H324 1103 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 CEP131Q9UPN4 1083 aa13.77□□□□□ -0.21
MRPS28-201ENST00000276585 GCN1Q92616 2671 aaKnown RBP13.77□□□□□ -0.21
MRPS28-201ENST00000276585 IGKV6-21A0A0C4DH24 114 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 TBX3O15119 743 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 ZIC2O95409 532 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-201ENST00000276585 STARD6P59095 220 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 GIT2Q14161 759 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 KIZQ2M2Z5 673 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 TSSK4Q6SA08 328 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 FAM20AQ96MK3 541 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 OSMRQ99650 979 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 SH2D3AQ9BRG2 576 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 NIFKQ9BYG3 293 aaKnown RBP13.76□□□□□ -0.21
MRPS28-201ENST00000276585 ZBP1Q9H171 429 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 ELAC1Q9H777 363 aaKnown RBP13.76□□□□□ -0.21
MRPS28-201ENST00000276585 EPS15L1Q9UBC2 864 aa13.76□□□□□ -0.21
MRPS28-201ENST00000276585 KANSL1LA0AUZ9 987 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 MAGEB2O15479 319 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 GDF9O60383 454 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
MRPS28-201ENST00000276585 GUCY1B3Q02153 619 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 XKR3Q5GH77 459 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 LAIR1Q6GTX8 287 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 EFCAB12Q6NXP0 572 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 PRR23CQ6ZRP0 262 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-201ENST00000276585 ANO5Q75V66 913 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 METTL13Q8N6R0 699 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 MYADMQ96S97 322 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 LLPHQ9BRT6 129 aaKnown RBP13.75□□□□□ -0.21
MRPS28-201ENST00000276585 SEMA4GQ9NTN9 838 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 SEPT9Q9UHD8 586 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-201ENST00000276585 ST3GAL5Q9UNP4 418 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 LHX6Q9UPM6 363 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 IGF2RP11717 2491 aa13.75□□□□□ -0.21
MRPS28-201ENST00000276585 MIA3Q5JRA6 1907 aa13.74□□□□□ -0.21
MRPS28-201ENST00000276585 CLUHO75153 1309 aa13.74□□□□□ -0.21
MRPS28-201ENST00000276585 GPR182O15218 404 aa13.74□□□□□ -0.21
MRPS28-201ENST00000276585 LRP3O75074 770 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms