RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TRAF1Q13077 416 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 TMEM67Q5HYA8 995 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 CBLL1Q75N03 491 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 KRTAP19-1Q8IUB9 90 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 SMC5Q8IY18 1101 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 FAM181AQ8N9Y4 354 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 USP38Q8NB14 1042 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 SCLYQ96I15 445 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 ASB2Q96Q27 587 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 OSBPL7Q9BZF2 842 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 CEP44Q9C0F1 390 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 NKX2-4Q9H2Z4 354 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 SSU72Q9NP77 194 aaKnown RBP11.25□□□□□ -0.61
LRTM1-201ENST00000273286 TRMT13Q9NUP7 481 aaKnown RBP11.25□□□□□ -0.61
LRTM1-201ENST00000273286 MAP3K20Q9NYL2 800 aaKnown RBP11.25□□□□□ -0.61
LRTM1-201ENST00000273286 CTNNA3Q9UI47 895 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 SLC5A6Q9Y289 635 aa11.25□□□□□ -0.61
LRTM1-201ENST00000273286 ENC1O14682 589 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 GH1P01241 217 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 CYP2C9P11712 490 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 SDSP20132 328 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
LRTM1-201ENST00000273286 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 STXBP2Q15833 593 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 CDC37Q16543 378 aaPredicted RBP11.24□□□□□ -0.61
LRTM1-201ENST00000273286 IMMTQ16891 758 aaKnown RBP11.24□□□□□ -0.61
LRTM1-201ENST00000273286 USH1GQ495M9 461 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 ALG1LQ6GMV1 187 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 ZNF574Q6ZN55 896 aaPredicted RBP11.24□□□□□ -0.61
LRTM1-201ENST00000273286 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 TBC1D10CQ8IV04 446 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 SAMD3Q8N6K7 520 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 CRBNQ96SW2 442 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 KRT23Q9C075 422 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 PPM1HQ9ULR3 514 aa11.24□□□□□ -0.61
LRTM1-201ENST00000273286 YBX2Q9Y2T7 364 aaKnown RBP11.24□□□□□ -0.61
LRTM1-201ENST00000273286 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
LRTM1-201ENST00000273286 DDX49Q9Y6V7 483 aaKnown RBP11.24□□□□□ -0.61
LRTM1-201ENST00000273286 LEFTY1O75610 366 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 IQCF3P0C7M6 154 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 POU3F3P20264 500 aaPredicted RBP11.23□□□□□ -0.61
LRTM1-201ENST00000273286 TMEM63BQ5T3F8 832 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 PLD6Q8N2A8 252 aaKnown RBP11.23□□□□□ -0.61
LRTM1-201ENST00000273286 RNF214Q8ND24 703 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 BCL7CQ8WUZ0 217 aaPredicted RBP11.23□□□□□ -0.61
LRTM1-201ENST00000273286 PPM1EQ8WY54 764 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 KATNAL1Q9BW62 490 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 NEDD4P46934 1319 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 LAMA4Q16363 1823 aa11.23□□□□□ -0.61
LRTM1-201ENST00000273286 CHD9Q3L8U1 2897 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 DHX16O60231 1041 aaKnown RBP11.22□□□□□ -0.61
LRTM1-201ENST00000273286 EFCAB14O75071 495 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 PAGE1O75459 146 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 PARP1P09874 1014 aaKnown RBP11.22□□□□□ -0.61
LRTM1-201ENST00000273286 PTGS1P23219 599 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 RBL2Q08999 1139 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 DGKDQ16760 1214 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 KCNV1Q6PIU1 500 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 DEFB128Q7Z7B8 93 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 ADGRF4Q8IZF3 695 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 GRIN3AQ8TCU5 1115 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 NETO1Q8TDF5 533 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 DUSP23Q9BVJ7 150 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 FTOQ9C0B1 505 aaKnown RBP eCLIP11.22□□□□□ -0.61
LRTM1-201ENST00000273286 GBF1Q92538 1859 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 TANC1Q9C0D5 1861 aa11.22□□□□□ -0.61
LRTM1-201ENST00000273286 EIF3JO75822 258 aaKnown RBP11.21□□□□□ -0.61
LRTM1-201ENST00000273286 MMP3P08254 477 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 KCNJ6P48051 423 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 GHRHRQ02643 423 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 PTGISQ16647 500 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 ARHGEF16Q5VV41 709 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 CWC27Q6UX04 472 aaKnown RBP11.21□□□□□ -0.61
LRTM1-201ENST00000273286 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
LRTM1-201ENST00000273286 VWCEQ96DN2 955 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 AMNQ9BXJ7 453 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 UBA5Q9GZZ9 404 aa11.21□□□□□ -0.61
LRTM1-201ENST00000273286 GIPC1O14908 333 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 CA3P07451 260 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 BMP6P22004 513 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 RABGGTBP53611 331 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 NUCB1Q02818 461 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 CCDC85BQ15834 202 aaPredicted RBP11.2□□□□□ -0.62
LRTM1-201ENST00000273286 QRICH1Q2TAL8 776 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 WFDC3Q8IUB2 231 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 HERC6Q8IVU3 1022 aa11.2□□□□□ -0.62
LRTM1-201ENST00000273286 TOP6BLQ8N6T0 577 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms