RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 RIMBP2O15034 1052 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 CALM1P0DP23 149 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 CALM2P0DP24 149 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 CALM3P0DP25 149 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 MFSD14BQ5SR56 506 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 RNF43Q68DV7 783 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 SMYD1Q8NB12 490 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 MKNK2Q9HBH9 465 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 KRT82Q9NSB4 513 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 ARHGEF38Q9NXL2 777 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 BARX2Q9UMQ3 279 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 SNX24Q9Y343 169 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 BRWD3Q6RI45 1802 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 CAPN9O14815 690 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 RHOBTB3O94955 611 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 CCNE1P24864 410 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 SLC35G1Q2M3R5 365 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 KBTBD12Q3ZCT8 623 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 WASHC2DQ5SRD0 308 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 LRRC74BQ6ZQY2 392 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 NCCRP1Q6ZVX7 275 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 TNFRSF25Q93038 417 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 NMD3Q96D46 503 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 MIPEPQ99797 713 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 OXCT2Q9BYC2 517 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 SUN2Q9UH99 717 aa16.85■□□□□ 0.29
CTDSP1-201ENST00000273062 FAM196BA6NMK8 535 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 BOLA2-SMG1P6H3BVE0 249 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 OR6B1O95007 311 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 ALOX15P16050 662 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 TNIP1Q15025 636 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 LONRF1Q17RB8 773 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 TNFAIP8L3Q5GJ75 292 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 INTS8Q75QN2 995 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 SPATA24Q86W54 205 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 PNMA1Q8ND90 353 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 TSPAN18Q96SJ8 248 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 FAM170AA1A519 330 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 ECE2O60344 883 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 XBP1P17861 261 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 HPCAP84074 193 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 ZRSR2Q15696 482 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 ACSBG2Q5FVE4 666 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 SLC15A3Q8IY34 581 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 CUEDC2Q9H467 287 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 DISC1Q9NRI5 854 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 DAAM1Q9Y4D1 1078 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 WASF2Q9Y6W5 498 aa16.84■□□□□ 0.29
CTDSP1-201ENST00000273062 RASGRF2O14827 1237 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 GOLGA8HP0CJ92 632 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 SCG2P13521 617 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 IL1R1P14778 569 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 ERFP50548 548 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 NLRP5P59047 1200 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 C6orf118Q5T5N4 469 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 TSHZ1Q6ZSZ6 1077 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 PIK3AP1Q6ZUJ8 805 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 LRRC57Q8N9N7 239 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 CKAP2Q8WWK9 683 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 MPP4Q96JB8 637 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 SEMA6BQ9H3T3 888 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 KCNK9Q9NPC2 374 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 STX8Q9UNK0 236 aa16.83■□□□□ 0.29
CTDSP1-201ENST00000273062 TSPY3P0CV98 308 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 TSPY8P0CW00 308 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 ATP2B4P23634 1241 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 SERPINB3P29508 390 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 GRIA2P42262 883 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 GSTO1P78417 241 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 TMED1Q13445 227 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 C4orf50Q6ZRC1 276 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 RINLQ6ZS11 566 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 C15orf52Q6ZUT6 534 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 RASGRP4Q8TDF6 673 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 NAT14Q8WUY8 206 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 SLITRK6Q9H5Y7 841 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 PCDH18Q9HCL0 1135 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 ERVK-5Q9HDB9 667 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 VAV1P15498 845 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 SLC9C1Q4G0N8 1177 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 TMEM110Q86TL2 294 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 ARHGAP18Q8N392 663 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 C17orf50Q8WW18 174 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 SPOCK2Q92563 424 aa16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 PAIP2BQ9ULR5 123 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 TDRKHQ9Y2W6 561 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-201ENST00000273062 RXRBP28702 533 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 FOXN2P32314 431 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 GALK1P51570 392 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 PPP4CP60510 307 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 POLR2FP61218 127 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 KPNB1Q14974 876 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 SLC18A3Q16572 532 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms