RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 FOXN3O00409 490 aaPredicted RBP18.03■□□□□ 0.48
CCDC40-201ENST00000269318 PRLRP16471 622 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 CCNA1P78396 465 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 KIF22Q14807 665 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 ZNF792Q3KQV3 632 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 TMEM63BQ5T3F8 832 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 KRT39Q6A163 491 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 ANKRD23Q86SG2 305 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 VPS36Q86VN1 386 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 TRIM50Q86XT4 487 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 DEPTORQ8TB45 409 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 LNX1Q8TBB1 728 aaPredicted RBP18.03■□□□□ 0.48
CCDC40-201ENST00000269318 VTI1AQ96AJ9 217 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 GBA2Q9HCG7 927 aaPredicted RBP18.03■□□□□ 0.48
CCDC40-201ENST00000269318 UBE2TQ9NPD8 197 aaPredicted RBP18.03■□□□□ 0.48
CCDC40-201ENST00000269318 PDGFCQ9NRA1 345 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 PCDHGC5Q9Y5F6 944 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 LRRIQ4A6NIV6 560 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 NOP56O00567 594 aaKnown RBP18.02■□□□□ 0.48
CCDC40-201ENST00000269318 GTF2H1P32780 548 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 LIG4P49917 911 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 CLCN6P51797 869 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 MAP2K1Q02750 393 aaPredicted RBP18.02■□□□□ 0.48
CCDC40-201ENST00000269318 STRN3Q13033 797 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 MKRN3Q13064 507 aaKnown RBP18.02■□□□□ 0.48
CCDC40-201ENST00000269318 DRP2Q13474 957 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 CAPSQ13938 189 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 ARHGAP44Q17R89 818 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 ARMCX2Q7L311 632 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
CCDC40-201ENST00000269318 ATP8B4Q8TF62 1192 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 SEMA4DQ92854 862 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 GLG1Q92896 1179 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 COPS5Q92905 334 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 SPATA33Q96N06 139 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 POP1Q99575 1024 aaKnown RBP18.02■□□□□ 0.48
CCDC40-201ENST00000269318 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
CCDC40-201ENST00000269318 EXTL3O43909 919 aa18.02■□□□□ 0.47
CCDC40-201ENST00000269318 CCDC172P0C7W6 258 aa18.02■□□□□ 0.47
CCDC40-201ENST00000269318 TXNP10599 105 aaKnown RBP18.02■□□□□ 0.47
CCDC40-201ENST00000269318 TTLL4Q14679 1199 aa18.02■□□□□ 0.47
CCDC40-201ENST00000269318 MMS19Q96T76 1030 aa18.02■□□□□ 0.47
CCDC40-201ENST00000269318 FAM213AQ9BRX8 229 aa18.02■□□□□ 0.47
CCDC40-201ENST00000269318 HAPLN2Q9GZV7 340 aa18.02■□□□□ 0.47
CCDC40-201ENST00000269318 TMEM134Q9H6X4 195 aa18.02■□□□□ 0.47
CCDC40-201ENST00000269318 TOPORSQ9NS56 1045 aaPredicted RBP18.02■□□□□ 0.47
CCDC40-201ENST00000269318 DIS3Q9Y2L1 958 aaKnown RBP18.02■□□□□ 0.47
CCDC40-201ENST00000269318 IGKV6-21A0A0C4DH24 114 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 K7ERI5 159 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 KIAA0391O15091 583 aaKnown RBP18.01■□□□□ 0.47
CCDC40-201ENST00000269318 ZNF185O15231 689 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 EDN1P05305 212 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 MARK3P27448 753 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 ADORA2AP29274 412 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 GPC3P51654 580 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 PLCB4Q15147 1175 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 USP37Q86T82 979 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 SCFD2Q8WU76 684 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 PSPC1Q8WXF1 523 aaKnown RBP18.01■□□□□ 0.47
CCDC40-201ENST00000269318 TLR10Q9BXR5 811 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 ANKZF1Q9H8Y5 726 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 KIAA1586Q9HCI6 787 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 ZNF446Q9NWS9 450 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 INTUQ9ULD6 942 aa18.01■□□□□ 0.47
CCDC40-201ENST00000269318 ZNF233A6NK53 670 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 ADCY3O60266 1144 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 GCLCP48506 637 aaPredicted RBP18■□□□□ 0.47
CCDC40-201ENST00000269318 CLDN10P78369 228 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 MKRN4PQ13434 485 aaPredicted RBP18■□□□□ 0.47
CCDC40-201ENST00000269318 DNAAF5Q86Y56 855 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 CREG2Q8IUH2 290 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 ABRAQ8N0Z2 381 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 NOA1Q8NC60 698 aaKnown RBP18■□□□□ 0.47
CCDC40-201ENST00000269318 MSANTD4Q8NCY6 345 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 PARD6BQ9BYG5 372 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 PLXNB2O15031 1838 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 MYH10P35580 1976 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 PDE2AO00408 941 aaPredicted RBP18■□□□□ 0.47
CCDC40-201ENST00000269318 PALMO75781 387 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 SLC26A2P50443 739 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 NAP1L1P55209 391 aaKnown RBP18■□□□□ 0.47
CCDC40-201ENST00000269318 CKAP4Q07065 602 aaKnown RBP18■□□□□ 0.47
CCDC40-201ENST00000269318 IER5Q5VY09 327 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 SPRYD7Q5W111 196 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 TAPT1Q6NXT6 567 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 C15orf39Q6ZRI6 1047 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 SV2AQ7L0J3 742 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 GLYCTKQ8IVS8 523 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 TAS1R2Q8TE23 839 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
CCDC40-201ENST00000269318 KAT5Q92993 513 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 CAPZA3Q96KX2 299 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 KREMEN1Q96MU8 473 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 OSBPL9Q96SU4 736 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 HYOU1Q9Y4L1 999 aa18■□□□□ 0.47
CCDC40-201ENST00000269318 GRID2IPA4D2P6 1211 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 NCK2O43639 380 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 GAS2O43903 313 aaKnown RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 ARHGAP1Q07960 439 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 PSMD6Q15008 389 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms