RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 VAMP7P51809 220 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 KRT17Q04695 432 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 MTM1Q13496 603 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 JAMLQ86YT9 394 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 C4orf33Q8N1A6 199 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 CCDC124Q96CT7 223 aaKnown RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 SEMA6BQ9H3T3 888 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 AS3MTQ9HBK9 375 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 SEL1LQ9UBV2 794 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 L3MBTL1Q9Y468 752 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 PDE2AO00408 941 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 MYBP10242 640 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 KLC1Q07866 573 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 KYNUQ16719 465 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 TMEM154Q6P9G4 183 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 SPECC1L-ADORA2AF8WAN1 911 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 CRCPO75575 148 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 NDUFB10O96000 172 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 CD58P19256 250 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 ARFIP2P53365 341 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 KCTD19Q17RG1 926 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 EDRF1Q3B7T1 1238 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 TEX2Q8IWB9 1127 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 FAM118BQ9BPY3 351 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 DLGAP2Q9P1A6 1054 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 GMNNO75496 209 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 LMNAP02545 664 aaKnown RBP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 VEGFAP15692 232 aaPredicted RBP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 CDC25CP30307 473 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 ASPHQ12797 758 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 DHX34Q14147 1143 aaKnown RBP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 CENPPQ6IPU0 288 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 MTMR8Q96EF0 704 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 C11orf70Q9BRQ4 267 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 TUBB6Q9BUF5 446 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 KCND1Q9NSA2 647 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 SEPT10Q9P0V9 454 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 CCDC195A0A1B0GUA6 201 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 ASNSP08243 561 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 CCND1P24385 295 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 SLC8A3P57103 927 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 MTMR1Q13613 665 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 EP400NLQ6ZTU2 488 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 C3P01024 1663 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 MST1RQ04912 1400 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 CAND2O75155 1236 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 TFAMQ00059 246 aaKnown RBP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 MDH1BQ5I0G3 518 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 DNAJC24Q6P3W2 148 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 SP8Q8IXZ3 490 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 ZBED8Q8IZ13 594 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 NLRP7Q8WX94 980 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 NRBP2Q9NSY0 501 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
VPS33A-201ENST00000267199 ARHGAP23Q9P227 1491 aa12.31□□□□□ -0.44
VPS33A-201ENST00000267199 TULP2O00295 520 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 CRYMQ14894 314 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 CEP55Q53EZ4 464 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 RGS9BPQ6ZS82 235 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 KNDC1Q76NI1 1749 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 ECE2O60344 883 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 PLCB4Q15147 1175 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 MMEL1Q495T6 779 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 IZUMO3Q5VZ72 239 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 GJB7Q6PEY0 223 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 LRP10Q7Z4F1 713 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 SH3RF1Q7Z6J0 888 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 RMDN3Q96TC7 470 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 ERP44Q9BS26 406 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 TMBIM4Q9HC24 238 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 IL17RBQ9NRM6 502 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 DONSONQ9NYP3 566 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 CACNA1FO60840 1977 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 CLDN3O15551 220 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 YARSP54577 528 aaKnown RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 ZC2HC1CQ53FD0 456 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 FIGNQ5HY92 759 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms