RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PRCCQ92733 491 aaPredicted RBP18.08■□□□□ 0.48
SQLE-201ENST00000265896 ASIC3Q9UHC3 531 aa18.08■□□□□ 0.48
SQLE-201ENST00000265896 TRPC6Q9Y210 931 aa18.08■□□□□ 0.48
SQLE-201ENST00000265896 STK38LQ9Y2H1 464 aa18.08■□□□□ 0.48
SQLE-201ENST00000265896 PSMD10O75832 226 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 PEX3P56589 373 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 AOC3Q16853 763 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 CCDC91Q7Z6B0 441 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 SEMA4DQ92854 862 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 ZNF653Q96CK0 615 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 HERPUD2Q9BSE4 406 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 OLFML3Q9NRN5 406 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 NYAP2Q9P242 653 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 A8MUI8 341 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 IPO5O00410 1097 aaKnown RBP18.07■□□□□ 0.48
SQLE-201ENST00000265896 KRT5P13647 590 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 STAT2P52630 851 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 BMT2Q1RMZ1 405 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 CCDC197Q8NCU1 140 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 NAP1L4Q99733 375 aaKnown RBP18.07■□□□□ 0.48
SQLE-201ENST00000265896 LBHD1Q9BQE6 289 aaPredicted RBP18.07■□□□□ 0.48
SQLE-201ENST00000265896 FAM129AQ9BZQ8 928 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 CARD9Q9H257 536 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 CHST7Q9NS84 486 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 AGAP1Q9UPQ3 857 aa18.07■□□□□ 0.48
SQLE-201ENST00000265896 CCDC169A6NNP5 214 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 PTGIRP43119 386 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 VAMP7P51809 220 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 SNCBQ16143 134 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 KYNUQ16719 465 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 AGBL2Q5U5Z8 902 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 TMEM179Q6ZVK1 233 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 CES2O00748 559 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 RASGRF2O14827 1237 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 PRELPP51888 382 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 FOXR2Q6PJQ5 311 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 PASD1Q8IV76 773 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 LMO3Q8TAP4 145 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 CCT6BQ92526 530 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 TLCD1Q96CP7 247 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 MYCBPQ99417 103 aaPredicted RBP18.06■□□□□ 0.48
SQLE-201ENST00000265896 ZSWIM1Q9BR11 485 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 SYT11Q9BT88 431 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 POLR3CQ9BUI4 534 aaPredicted RBP18.06■□□□□ 0.48
SQLE-201ENST00000265896 VEZTQ9HBM0 779 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 A0A0A6YYK5 440 aaPredicted RBP18.06■□□□□ 0.48
SQLE-201ENST00000265896 TCP11X1B4DZS4 312 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 CHRNA5P30532 468 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 KCNJ2P63252 427 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 CEP55Q53EZ4 464 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 ATXN2LQ8WWM7 1075 aaKnown RBP18.06■□□□□ 0.48
SQLE-201ENST00000265896 N4BP2L2Q92802 583 aaPredicted RBP18.06■□□□□ 0.48
SQLE-201ENST00000265896 TACO1Q9BSH4 297 aaKnown RBP18.06■□□□□ 0.48
SQLE-201ENST00000265896 CXorf56Q9H5V9 222 aa18.06■□□□□ 0.48
SQLE-201ENST00000265896 ADRB2P07550 413 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 POLR2MP0CAP2 368 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 GPC5P78333 572 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 ZFYVE27Q5T4F4 411 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 SEL1L2Q5TEA6 688 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 EMC10Q5UCC4 262 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 HOOK3Q86VS8 718 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 UBL4BQ8N7F7 174 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 ZNF564Q8TBZ8 553 aaPredicted RBP18.05■□□□□ 0.48
SQLE-201ENST00000265896 SPIRE2Q8WWL2 714 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 CPA5Q8WXQ8 436 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 KREMEN1Q96MU8 473 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.05■□□□□ 0.48
SQLE-201ENST00000265896 PNMA3Q9UL41 463 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 PHF2O75151 1096 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 CHRNB2P17787 502 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 ITGB5P18084 799 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 FAM47EQ6ZV65 393 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 ZNF317Q96PQ6 595 aaPredicted RBP18.05■□□□□ 0.48
SQLE-201ENST00000265896 TXLNGYQ9BZA5 131 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 USTQ9Y2C2 406 aa18.05■□□□□ 0.48
SQLE-201ENST00000265896 GAP43P17677 238 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 FAM102BQ5T8I3 360 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 NUGGCQ68CJ6 796 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 MKL1Q969V6 931 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 C9orf72Q96LT7 481 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 CRAMP1Q96RY5 1269 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 ZBTB12Q9Y330 459 aaPredicted RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 TELO2Q9Y4R8 837 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 CCT8L1PA6NM43 557 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 CHUKO15111 745 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 RIPK2O43353 540 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 ECE2O60344 883 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 FOSP01100 380 aaPredicted RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 BCRP11274 1271 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 SCP2P22307 547 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 MEX3CQ5U5Q3 659 aaKnown RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 HHIPL2Q6UWX4 724 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 YTHDF3Q7Z739 585 aaKnown RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 EXOC3L1Q86VI1 746 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 SPATS2Q86XZ4 545 aaKnown RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 CCDC50Q8IVM0 306 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms