RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SSU72P8A0A1W2PR75 194 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 CCDC169A6NNP5 214 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 RASGRF2O14827 1237 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 TAC1P20366 129 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 RPL21P46778 160 aaKnown RBP9.4□□□□□ -0.91
VAPB-201ENST00000265619 RAPGEF1Q13905 1077 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 CCDC6Q16204 474 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 FAM114A1Q8IWE2 563 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 ZBTB8BQ8NAP8 495 aaPredicted RBP9.4□□□□□ -0.91
VAPB-201ENST00000265619 ARHGEF2Q92974 986 aaKnown RBP9.4□□□□□ -0.91
VAPB-201ENST00000265619 C18orf8Q96DM3 657 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 CADM1Q9BY67 442 aaKnown RBP9.4□□□□□ -0.91
VAPB-201ENST00000265619 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 KLHL14Q9P2G3 628 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 MROH7Q68CQ1 1323 aa9.4□□□□□ -0.91
VAPB-201ENST00000265619 RIPK2O43353 540 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SKIV2L2P42285 1042 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 HPCAP84074 193 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 LRRC41Q15345 812 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 MFSD14BQ5SR56 506 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 TMEM110Q86TL2 294 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SPATA24Q86W54 205 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 ZDHHC14Q8IZN3 488 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 ZC3H12CQ9C0D7 883 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 IQCGQ9H095 443 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 DCLRE1BQ9H816 532 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 KBTBD4Q9NVX7 518 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 TBK1Q9UHD2 729 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 KIAA0391O15091 583 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 NMT2O60551 498 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 ACTN1P12814 892 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 ALOX15P16050 662 aaPredicted RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 OCRLQ01968 901 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 PRPF4BQ13523 1007 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 ZNF571Q7Z3V5 609 aaPredicted RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 CCDC25Q86WR0 208 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SCUBE1Q8IWY4 988 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 RIN3Q8TB24 985 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SHKBP1Q8TBC3 707 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 MIPOL1Q8TD10 442 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 NAT14Q8WUY8 206 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 LENG1Q96BZ8 264 aaPredicted RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 POP1Q99575 1024 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 VCX3BQ9H321 246 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 VCX3AQ9NNX9 186 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 DDX18Q9NVP1 670 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 SPATA7Q9P0W8 599 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 ATP6V0A2Q9Y487 856 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 DAAM1Q9Y4D1 1078 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 HEY1Q9Y5J3 304 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 GSG1L2A8MUP6 293 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 PPEF1O14829 653 aaPredicted RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 ECE2O60344 883 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 ACSL3O95573 720 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 PLCG2P16885 1265 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 AMPD1P23109 780 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 CACNB3P54284 484 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 PTK2Q05397 1052 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 DNAJC3Q13217 504 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 TMED1Q13445 227 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 UBE3CQ15386 1083 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 MTFR1Q15390 333 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SLC9C1Q4G0N8 1177 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SH3D19Q5HYK7 790 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 DPP8Q6V1X1 898 aaPredicted RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 NCCRP1Q6ZVX7 275 aaPredicted RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 ZNF804AQ7Z570 1209 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 AGGF1Q8N302 714 aaeCLIP9.39□□□□□ -0.91
VAPB-201ENST00000265619 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 DYNLL2Q96FJ2 89 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 PWWP2AQ96N64 755 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 ERP44Q9BS26 406 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 LSM14BQ9BX40 385 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 FAM192AQ9GZU8 254 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 NT5C3AQ9H0P0 336 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 OSGEPQ9NPF4 335 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 TXLNGQ9NUQ3 528 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 GRID1Q9ULK0 1009 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 SCAF8Q9UPN6 1271 aaKnown RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 TBC1D30Q9Y2I9 924 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 STXBP5LQ9Y2K9 1186 aa9.39□□□□□ -0.91
VAPB-201ENST00000265619 HEMK1Q9Y5R4 338 aaPredicted RBP9.39□□□□□ -0.91
VAPB-201ENST00000265619 TMEM110-MUSTN1A8MSY1 372 aa9.38□□□□□ -0.91
VAPB-201ENST00000265619 POLRMTO00411 1230 aaKnown RBP9.38□□□□□ -0.91
VAPB-201ENST00000265619 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
VAPB-201ENST00000265619 USP1O94782 785 aa9.38□□□□□ -0.91
VAPB-201ENST00000265619 TMCC1O94876 653 aa9.38□□□□□ -0.91
VAPB-201ENST00000265619 SERPING1P05155 500 aa9.38□□□□□ -0.91
VAPB-201ENST00000265619 SLURP2P0DP57 97 aa9.38□□□□□ -0.91
VAPB-201ENST00000265619 FGFR1P11362 822 aa9.38□□□□□ -0.91
VAPB-201ENST00000265619 SKIP12755 728 aa9.38□□□□□ -0.91
VAPB-201ENST00000265619 VAV1P15498 845 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms