RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 NLRP9Q7RTR0 991 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 RASSF3Q86WH2 238 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 CCDC125Q86Z20 511 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 SLC30A5Q8TAD4 765 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 ELMO3Q96BJ8 720 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 OPTNQ96CV9 577 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 SHCBP1LQ9BZQ2 653 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 DDX39AO00148 427 aaKnown RBP17.38■□□□□ 0.37
GPC1-201ENST00000264039 KIAA0391O15091 583 aaKnown RBP17.38■□□□□ 0.37
GPC1-201ENST00000264039 RARGP13631 454 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 ATP6V1B1P15313 513 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 SSTR3P32745 418 aaPredicted RBP17.38■□□□□ 0.37
GPC1-201ENST00000264039 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
GPC1-201ENST00000264039 ALG3Q92685 438 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 CYP4F11Q9HBI6 524 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 TAS2R14Q9NYV8 317 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 NAALADL1Q9UQQ1 740 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 PFASO15067 1338 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 TMCO4Q5TGY1 634 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 RGS9BPQ6ZS82 235 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 ZNF572Q7Z3I7 529 aaPredicted RBP17.38■□□□□ 0.37
GPC1-201ENST00000264039 CENPTQ96BT3 561 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 TLCD1Q96CP7 247 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 THTPAQ9BU02 230 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 KLHL11Q9NVR0 708 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 FAM208AQ9UK61 1670 aaKnown RBP17.38■□□□□ 0.37
GPC1-201ENST00000264039 MYBP10242 640 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 SUSD4Q5VX71 490 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 GALNT17Q6IS24 598 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 IZUMO2Q6UXV1 221 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 ANKMY2Q8IV38 441 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 C4orf32Q8N8J7 132 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 NDNQ99608 321 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 DENND2DQ9H6A0 471 aaPredicted RBP17.37■□□□□ 0.37
GPC1-201ENST00000264039 PSTPIP2Q9H939 334 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 SH3BP1Q9Y3L3 701 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 PCDH11XQ9BZA7 1347 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 PCDH11YQ9BZA8 1340 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 USP17L5A8MUK1 530 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 H3BRJ5 948 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 CDH16O75309 829 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 ECHS1P30084 290 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 METTL14Q9HCE5 456 aaKnown RBP17.37■□□□□ 0.37
GPC1-201ENST00000264039 ARMCX1Q9P291 453 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 ARFIP2P53365 341 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 MYL7Q01449 175 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 PPP2R5CQ13362 524 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 ACBD5Q5T8D3 534 aaPredicted RBP17.37■□□□□ 0.37
GPC1-201ENST00000264039 MXD3Q9BW11 206 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 SPZ1Q9BXG8 430 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 IKZF4Q9H2S9 585 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 TYW1Q9NV66 732 aaKnown RBP17.37■□□□□ 0.37
GPC1-201ENST00000264039 NDE1Q9NXR1 346 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 GALNT8Q9NY28 637 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 HEY2Q9UBP5 337 aa17.37■□□□□ 0.37
GPC1-201ENST00000264039 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.37■□□□□ 0.37
GPC1-201ENST00000264039 CCDC195A0A1B0GUA6 201 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 STK10O94804 968 aaKnown RBP17.36■□□□□ 0.37
GPC1-201ENST00000264039 PAEPP09466 180 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 POLGP54098 1239 aaPredicted RBP17.36■□□□□ 0.37
GPC1-201ENST00000264039 SLC26A7Q8TE54 656 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 CLIC5Q9NZA1 410 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 LRCH1Q9Y2L9 728 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 LMNAP02545 664 aaKnown RBP17.36■□□□□ 0.37
GPC1-201ENST00000264039 SNAP25P60880 206 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 MCL1Q07820 350 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 KNOP1Q1ED39 458 aaKnown RBP17.36■□□□□ 0.37
GPC1-201ENST00000264039 KHDC1Q4VXA5 237 aaKnown RBP17.36■□□□□ 0.37
GPC1-201ENST00000264039 TRIM55Q9BYV6 548 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 ITSN1Q15811 1721 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 B2RBV5 119 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 MAPK4P31152 587 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 COILP38432 576 aaPredicted RBP17.36■□□□□ 0.37
GPC1-201ENST00000264039 GCLMP48507 274 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 DYNLT1P63172 113 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 MTMR2Q13614 643 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 ASTE1Q2TB18 679 aaPredicted RBP17.36■□□□□ 0.37
GPC1-201ENST00000264039 LVRNQ6Q4G3 990 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 MAP7D3Q8IWC1 876 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 GALNT15Q8N3T1 639 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 PNMA5Q96PV4 448 aa17.36■□□□□ 0.37
GPC1-201ENST00000264039 CACNA1FO60840 1977 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 MYH15Q9Y2K3 1946 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 TCRBV7S2A1N4TA0A589 114 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 MAGEA13PA6NCF6 341 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 HNRNPRO43390 633 aaKnown RBP17.35■□□□□ 0.37
GPC1-201ENST00000264039 SOX5P35711 763 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 ZCWPW2Q504Y3 356 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 SH2D4BQ5SQS7 431 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 DUPD1Q68J44 220 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 SYN2Q92777 582 aaPredicted RBP17.35■□□□□ 0.37
GPC1-201ENST00000264039 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 RBM15Q96T37 977 aaKnown RBP eCLIP17.35■□□□□ 0.37
GPC1-201ENST00000264039 ACP6Q9NPH0 428 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 AIPL1Q9NZN9 384 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms