RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ARP10275 920 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 PDE6BP35913 854 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 PPP3CAQ08209 521 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 Q4G0T1 1027 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 C1orf186Q6ZWK4 172 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 TRPM8Q7Z2W7 1104 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 SLC47A2Q86VL8 602 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 RHOT2Q8IXI1 618 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 ZNF564Q8TBZ8 553 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-201ENST00000263856 ARHGEF2Q92974 986 aaKnown RBP13.32□□□□□ -0.28
CHMP3-201ENST00000263856 SAAL1Q96ER3 474 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 STAMBPL1Q96FJ0 436 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
CHMP3-201ENST00000263856 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 NCANO14594 1321 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 RIPK2O43353 540 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 GYS1P13807 737 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 CHRNA3P32297 505 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 KCNJ2P63252 427 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 ADCY2Q08462 1091 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 C6orf118Q5T5N4 469 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 FAM47EQ6ZV65 393 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
CHMP3-201ENST00000263856 COA1Q9GZY4 146 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 OLFML3Q9NRN5 406 aa13.32□□□□□ -0.28
CHMP3-201ENST00000263856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.32□□□□□ -0.28
CHMP3-201ENST00000263856 TMEM120BA0PK00 339 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 ATP6V1G2O95670 118 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-201ENST00000263856 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-201ENST00000263856 SGO2Q562F6 1265 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 TAOK1Q7L7X3 1001 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 CDC42EP4Q9H3Q1 356 aaKnown RBP13.31□□□□□ -0.28
CHMP3-201ENST00000263856 PRR12Q9ULL5 1215 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 C5orf60A6NFR6 353 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 SKAP2O75563 359 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-201ENST00000263856 ECEL1O95672 775 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 RARAP10276 462 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 VAMP7P51809 220 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 GSCP56915 257 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-201ENST00000263856 KRT17Q04695 432 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 KYNUQ16719 465 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 LLGL2Q6P1M3 1020 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 C15orf52Q6ZUT6 534 aaKnown RBP13.31□□□□□ -0.28
CHMP3-201ENST00000263856 PRUNE1Q86TP1 453 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 DHX38Q92620 1227 aaKnown RBP13.31□□□□□ -0.28
CHMP3-201ENST00000263856 BORCS6Q96GS4 357 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 PCDHB18PQ96TA0 734 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 ADAM7Q9H2U9 754 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 GGA2Q9UJY4 613 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 SUFUQ9UMX1 484 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
CHMP3-201ENST00000263856 GTPBP10A4D1E9 387 aaKnown RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 A8MUI8 341 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 TBX3O15119 743 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 GH1P01241 217 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 PAEPP09466 180 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 COILP38432 576 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 MMP13P45452 471 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 PRELPP51888 382 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 JAG1P78504 1218 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 RBM26Q5T8P6 1007 aaKnown RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 ZNF317Q96PQ6 595 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 POLR3CQ9BUI4 534 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 UNC45AQ9H3U1 944 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 GPRC5CQ9NQ84 441 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 HOMER2Q9NSB8 354 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 TRIM33Q9UPN9 1127 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 AGAP1Q9UPQ3 857 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 STRCQ7RTU9 1775 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 NHSQ6T4R5 1651 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 WNK3Q9BYP7 1800 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 CHKAP35790 457 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 PTGIRP43119 386 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 MXI1P50539 228 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 AUHQ13825 339 aaKnown RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 GRIPAP1Q4V328 841 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 CYP4F22Q6NT55 531 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 NOP9Q86U38 636 aaKnown RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 SIAH1Q8IUQ4 282 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 SRRM1Q8IYB3 904 aaKnown RBP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 KIFC3Q9BVG8 833 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 KDM4CQ9H3R0 1056 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 ECT2Q9H8V3 914 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 TCEAL9Q9UHQ7 104 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 USTQ9Y2C2 406 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 EIF3DO15371 548 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHMP3-201ENST00000263856 THAP12O43422 761 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 EXOC3L1Q86VI1 746 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 OLIG1Q8TAK6 271 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 SEC14L1Q92503 715 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 KLHL29Q96CT2 875 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 TRIM7Q9C029 511 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 MCM8Q9UJA3 840 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
CHMP3-201ENST00000263856 ADAMTSL1Q8N6G6 1762 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms