RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 GIMAP8Q8ND71 665 aaPredicted RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 FAM167BQ9BTA0 163 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 RAPGEF6Q8TEU7 1601 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 KLHL18O94889 574 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 FYNP06241 537 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 SCRN1Q12765 414 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 EXD1Q8NHP7 514 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 PODXLO00592 558 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 HIST1H2AGP0C0S8 130 aaPredicted RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 HIST1H2ADP20671 130 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 HOXD10P28358 340 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 PSMC5P62195 406 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 BFSP2Q13515 415 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 BTBD8Q5XKL5 378 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 HIST1H2AHQ96KK5 128 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 HIST1H2AJQ99878 128 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 H2AFJQ9BTM1 129 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 KANSL2Q9H9L4 492 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 ATP9BO43861 1147 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 PFKFB2O60825 505 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 GCFC2P16383 781 aaKnown RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 CDH2P19022 906 aaPredicted RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 SARM1Q6SZW1 724 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 OLFML3Q9NRN5 406 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 PRR23AA6NEV1 266 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 KRT31Q15323 416 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 MAPK6Q16659 721 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 PGBD4Q96DM1 585 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 RPRD1BQ9NQG5 326 aaKnown RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 MAPRE2Q15555 327 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 SLC44A4Q53GD3 710 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 SGO1Q5FBB7 561 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 APOA5Q6Q788 366 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 EXOSC4Q9NPD3 245 aaKnown RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 MAN1B1Q9UKM7 699 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 ATP6V1C1P21283 382 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 MAPRE1Q15691 268 aaKnown RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 BBS2Q9BXC9 721 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 OSBPL1AQ9BXW6 950 aa12.03□□□□□ -0.48
PTPN4-201ENST00000263708 DHX35Q9H5Z1 703 aaKnown RBP12.03□□□□□ -0.48
PTPN4-201ENST00000263708 AKAP10O43572 662 aa12.02□□□□□ -0.48
PTPN4-201ENST00000263708 CHSY1Q86X52 802 aa12.02□□□□□ -0.48
PTPN4-201ENST00000263708 FOXP1Q9H334 677 aaPredicted RBP12.02□□□□□ -0.48
PTPN4-201ENST00000263708 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.48
PTPN4-201ENST00000263708 MLH1P40692 756 aa12.02□□□□□ -0.48
PTPN4-201ENST00000263708 PMS2P54278 862 aa12.02□□□□□ -0.48
PTPN4-201ENST00000263708 MTERF3Q96E29 417 aa12.02□□□□□ -0.48
PTPN4-201ENST00000263708 OLFM3Q96PB7 478 aa12.02□□□□□ -0.48
PTPN4-201ENST00000263708 PALMO75781 387 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 JADE3Q92613 823 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 ZNF668Q96K58 619 aaPredicted RBP12.02□□□□□ -0.49
PTPN4-201ENST00000263708 PSD3Q9NYI0 1048 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 TK2O00142 265 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 RNF103O00237 685 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 NFIBO00712 420 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 PCP11498 1178 aaKnown RBP12.02□□□□□ -0.49
PTPN4-201ENST00000263708 ABCE1P61221 599 aaKnown RBP12.02□□□□□ -0.49
PTPN4-201ENST00000263708 MTMR1Q13613 665 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 FAM47E-STBD1D6RA91 191 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 A0A087WUV0 522 aaPredicted RBP12.02□□□□□ -0.49
PTPN4-201ENST00000263708 HAUS5O94927 633 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 SDC4P31431 198 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 ERFP50548 548 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 RPS6P62753 249 aaKnown RBP12.02□□□□□ -0.49
PTPN4-201ENST00000263708 ARHGEF7Q14155 803 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 PTH1RQ03431 593 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 SYCP2LQ5T4T6 812 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 DGKHQ86XP1 1220 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 BRIP1Q9BX63 1249 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 EHD2Q9NZN4 543 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 MYO1CO00159 1063 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 TTC13Q8NBP0 860 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 CD274Q9NZQ7 290 aa12.02□□□□□ -0.49
PTPN4-201ENST00000263708 CNOT8Q9UFF9 292 aaKnown RBP12.02□□□□□ -0.49
PTPN4-201ENST00000263708 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 APOL1O14791 398 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 TSC22D2O75157 780 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 TYK2P29597 1187 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 NBPF15Q8N660 670 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 THAP11Q96EK4 314 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 LATS2Q9NRM7 1088 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 ABCB11O95342 1321 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 BRD8Q9H0E9 1235 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 PHLPP2Q6ZVD8 1323 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 ATXN3P54252 364 aaPredicted RBP12.01□□□□□ -0.49
PTPN4-201ENST00000263708 NCKAP1LP55160 1127 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 TP53BP2Q13625 1128 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 ZBED8Q8IZ13 594 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 FAM213AQ9BRX8 229 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 V9GYQ6 96 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 AATKQ6ZMQ8 1374 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 JAK3P52333 1124 aa12.01□□□□□ -0.49
PTPN4-201ENST00000263708 USP39Q53GS9 565 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms