RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 SYN2Q92777 582 aaPredicted RBP17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 PPP1R16BQ96T49 567 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 DDX20Q9UHI6 824 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 ZBED4O75132 1171 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 PPP1R12CQ9BZL4 782 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 KCTD10Q9H3F6 313 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 AKAP11Q9UKA4 1901 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 CHUKO15111 745 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 MXRA7P84157 204 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 EPHA7Q15375 998 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 CBWD2Q8IUF1 395 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 IQCGQ9H095 443 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 STRN3Q13033 797 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 NT5DC3Q86UY8 548 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 CTAGE3PQ8IX95 158 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 PRMT6Q96LA8 375 aaPredicted RBP17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 PWWP2AQ96N64 755 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 MEIS2O14770 477 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 NEBLO76041 1014 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 SUN1O94901 812 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 PCK1P35558 622 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 SEZ6Q53EL9 994 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 LNX1Q8TBB1 728 aaPredicted RBP17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 HSPBP1Q9NZL4 362 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 SUCLA2Q9P2R7 463 aaPredicted RBP17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 SYNGAP1Q96PV0 1343 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 TAF1P21675 1872 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 OPLAHO14841 1288 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 ZBTB33Q86T24 672 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 SLC47A2Q86VL8 602 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 PARP9Q8IXQ6 854 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 UNC45AQ9H3U1 944 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 PITPNM2Q9BZ72 1349 aa17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 MARF1Q9Y4F3 1742 aaKnown RBP17.34■□□□□ 0.37
PDZRN3-201ENST00000263666 MTMR1Q13613 665 aa17.33■□□□□ 0.37
PDZRN3-201ENST00000263666 CPNE8Q86YQ8 564 aa17.33■□□□□ 0.37
PDZRN3-201ENST00000263666 ARHGEF19Q8IW93 802 aa17.33■□□□□ 0.37
PDZRN3-201ENST00000263666 PHLPP1O60346 1717 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 EIF3BP55884 814 aaKnown RBP17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 C6orf118Q5T5N4 469 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 TMC3Q7Z5M5 1100 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 FAM167BQ9BTA0 163 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 ERVK-5Q9HDB9 667 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 SGK1O00141 431 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 HSPA9P38646 679 aaKnown RBP17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 ACOT2P49753 483 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 ATP11AP98196 1134 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 PPP2R5EQ16537 467 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 PRUNE1Q86TP1 453 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 FMNL3Q8IVF7 1028 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 DDX23Q9BUQ8 820 aaKnown RBP17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 SAYSD1Q9NPB0 183 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 IGSF9BQ9UPX0 1349 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 MYH15Q9Y2K3 1946 aa17.33■□□□□ 0.36
PDZRN3-201ENST00000263666 EXOC1LA0A1B0GW35 172 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 GOLGA8RI6L899 631 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 APOBEC3HQ6NTF7 200 aaKnown RBP17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 TMEM270Q6UE05 265 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 PAGR1Q9BTK6 254 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 CNOT10Q9H9A5 744 aaKnown RBP17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 SPON1Q9HCB6 807 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 LRRD1A4D1F6 860 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 PIAS1O75925 651 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 LLGL2Q6P1M3 1020 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 ASTN1O14525 1302 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 RASA4BC9J798 803 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 RASA4O43374 803 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 TMEM253P0C7T8 217 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 SPATA31C1P0DKV0 1188 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 SMARCA1P28370 1054 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 PPP1R14CQ8TAE6 165 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 ALG3Q92685 438 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 TMEM117Q9H0C3 514 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 SLC24A3Q9HC58 644 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 INTUQ9ULD6 942 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 A0A1B0GUA9 196 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 SLITRK3O94933 977 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 IL1R1P14778 569 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 CA4P22748 312 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 ATP5DP30049 168 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 CDC25CP30307 473 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 ADCY2Q08462 1091 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 BSPRYQ5W0U4 402 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 NXF1Q9UBU9 619 aaKnown RBP17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 TRPC6Q9Y210 931 aa17.32■□□□□ 0.36
PDZRN3-201ENST00000263666 MAPK7Q13164 816 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 BRDTQ58F21 947 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 PPP1R21Q6ZMI0 780 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms