RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 TSPAN1O60635 241 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 TOM1L1O75674 476 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 FGFR4P22455 802 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 NCKAP1LP55160 1127 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 SNRPFP62306 86 aaKnown RBP13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 FAM189BP81408 668 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 E2F4Q16254 413 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 NAALADL2Q58DX5 795 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.211e-7■■■■□ 21.5
CLNS1A-201ENST00000263309 ZNF720Q7Z2F6 126 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 ECHDC2Q86YB7 292 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 ELOA2Q8IYF1 753 aaPredicted RBP13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 TMEM87AQ8NBN3 555 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 STAMQ92783 540 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 TIFAQ96CG3 184 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 POLD4Q9HCU8 107 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 ARHGAP28Q9P2N2 729 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 TNFSF13BQ9Y275 285 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 XPOTO43592 962 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 LPXNO60711 386 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 RPN1P04843 607 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 MCF2P10911 925 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 ARF4P18085 180 aaPredicted RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 ALDH7A1P49419 539 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 GTF2BQ00403 316 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 KRT17Q04695 432 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 GPNMBQ14956 572 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 FAM26FQ5R3K3 315 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 PPP2R2DQ66LE6 453 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 MPZL3Q6UWV2 235 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 CMTR2Q8IYT2 770 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 TMEM161BQ8NDZ6 487 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 ACAP3Q96P50 834 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 GSDMAQ96QA5 445 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 TSPAN18Q96SJ8 248 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 TMEM117Q9H0C3 514 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 PUF60Q9UHX1 559 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 GIT1Q9Y2X7 761 aa13.75□□□□□ -0.21
CLNS1A-201ENST00000263309 TBKBP1A7MCY6 615 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 C9IYK1 514 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 EIF3DO15371 548 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 NPTXRO95502 500 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 MBD3O95983 291 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 COASYQ13057 564 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 DSC3Q14574 896 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 CLEC17AQ6ZS10 378 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 USP37Q86T82 979 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 CD302Q8IX05 232 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 DEFB123Q8N688 67 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 ACO2Q99798 780 aaKnown RBP13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 TMX1Q9H3N1 280 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 RSAD1Q9HA92 442 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 TBC1D7Q9P0N9 293 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 ANKFY1Q9P2R3 1169 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 UNC80Q8N2C7 3258 aa13.74□□□□□ -0.21
CLNS1A-201ENST00000263309 UBE4BO95155 1302 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 ALPK3Q96L96 1907 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 CALUO43852 315 aaPredicted RBP13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 DGKIO75912 1065 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 ALDH2P05091 517 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 RB1P06400 928 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 MAPK7Q13164 816 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 PTPROQ16827 1216 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 Q7L0L9 218 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 FMR1NBQ8N0W7 255 aaPredicted RBP13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 DAW1Q8N136 415 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 LRRC43Q8N309 656 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 BSNDQ8WZ55 320 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 POMGNT1Q8WZA1 660 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 DNAJC19Q96DA6 116 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 GAS2L1Q99501 681 aaPredicted RBP13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 TSG101Q99816 390 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 MSTO1Q9BUK6 570 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 APOL6Q9BWW8 343 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 SLC38A7Q9NVC3 462 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 STXBP5LQ9Y2K9 1186 aa13.73□□□□□ -0.21
CLNS1A-201ENST00000263309 A0A087X0B3 334 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 LAG3P18627 525 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 DNAJB2P25686 324 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 RPL13P26373 211 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 HOXA11P31270 313 aaPredicted RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 PPM1AP35813 382 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 DEFB103AP81534 67 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 CUL4BQ13620 913 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 KCNB1Q14721 858 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms