RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 HMGCS2P54868 508 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 SLC39A14Q15043 492 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 RPS6KA1Q15418 735 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 HAUS3Q68CZ6 603 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 PLA2G12BQ9BX93 195 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 PITPNM3Q9BZ71 974 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 LACRTQ9GZZ8 138 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 NMRK2Q9NPI5 230 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 ANLNQ9NQW6 1124 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 ZNF510Q9Y2H8 683 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 PASKQ96RG2 1323 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 A6NJR5 290 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 GSG1L2A8MUP6 293 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 SEMA3EO15041 775 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 HOXD11P31277 338 aaPredicted RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 SERPINB8P50452 374 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 PLTPP55058 493 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 HUNKP57058 714 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 FOXD4Q12950 439 aaPredicted RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 PAK1Q13153 545 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 TBX2Q13207 712 aaPredicted RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 ITIH4Q14624 930 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 C16orf72Q14CZ0 275 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 SLC10A5Q5PT55 438 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 STYK1Q6J9G0 422 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 PATL1Q86TB9 770 aaKnown RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 KIAA2013Q8IYS2 634 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 GPR108Q9NPR9 543 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 SEPT11Q9NVA2 429 aaKnown RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 SELENONQ9NZV5 590 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 PI4KBQ9UBF8 816 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 MTRF1LQ9UGC7 380 aaKnown RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 DSEQ9UL01 958 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 PACSIN2Q9UNF0 486 aaPredicted RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 AGAP1Q9UPQ3 857 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 A0A1B0GTH6 734 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 TRAF5O00463 557 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 XPOTO43592 962 aaKnown RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 EGFRP00533 1210 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 VAV1P15498 845 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 CDR2Q01850 454 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 MORC3Q14149 939 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 PIK3AP1Q6ZUJ8 805 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 FBXO33Q7Z6M2 555 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 METTL16Q86W50 562 aaKnown RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 RASSF3Q86WH2 238 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 TTC30AQ86WT1 665 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 CDAN1Q8IWY9 1227 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 MYOCDQ8IZQ8 938 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 AGBL1Q96MI9 1066 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 SENP2Q9HC62 589 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ITGB4P16144 1822 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 MAGEB3O15480 346 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 GYG2O15488 501 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 NAT2P11245 290 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 KIF11P52732 1056 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 OXCT1P55809 520 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 TGFB2P61812 414 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 AMPD2Q01433 879 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ZNF394Q53GI3 561 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 STRIP1Q5VSL9 837 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 CYP4X1Q8N118 509 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ARHGAP24Q8N264 748 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.93□□□□□ -0.98
LDB3-201ENST00000263066 DDHD1Q8NEL9 900 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 CAVIN3Q969G5 261 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 PHF12Q96QT6 1004 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ZBED2Q9BTP6 218 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 FAM129AQ9BZQ8 928 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 SYNCQ9H7C4 482 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 DCLRE1BQ9H816 532 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ARPP21Q9UBL0 812 aaPredicted RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 TRAF3IP3Q9Y228 551 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 NEDD4P46934 1319 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 AOX1Q06278 1338 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ARHGAP42A6NI28 874 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ERCC5P28715 1186 aaPredicted RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 PPIDQ08752 370 aaKnown RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 RALGDSQ12967 914 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 GRAMD1BQ3KR37 738 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 PAPD7Q5XG87 772 aaKnown RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 TMEM214Q6NUQ4 689 aaKnown RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 CERS5Q8N5B7 392 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 HIPK4Q8NE63 616 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 TTC8Q8TAM2 541 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 CASKIN2Q8WXE0 1202 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 GFM2Q969S9 779 aaKnown RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 CEP95Q96GE4 821 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ZSCAN10Q96SZ4 725 aaPredicted RBP8.93□□□□□ -0.98
LDB3-201ENST00000263066 PARVBQ9HBI1 364 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 NMRK1Q9NWW6 199 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 CROTQ9UKG9 612 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 ANGPTL2Q9UKU9 493 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 CCPG1Q9ULG6 757 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 TRIM17Q9Y577 477 aa8.93□□□□□ -0.98
LDB3-201ENST00000263066 DAPK3O43293 454 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 TJP3O95049 919 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 GNA14O95837 355 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 RPL13P26373 211 aaKnown RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 HOXA13P31271 388 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms