RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CBWD1Q9BRT8 395 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 SLCO1B3Q9NPD5 702 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 GPRC5CQ9NQ84 441 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 ZMYND8Q9ULU4 1186 aaPredicted RBP13.98□□□□□ -0.17
SNX1-201ENST00000261889 SUGT1Q9Y2Z0 365 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 EME2A4GXA9 379 aaPredicted RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 GNA14O95837 355 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 RARAP10276 462 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 PTENP60484 403 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 MTMR3Q13615 1198 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 AUHQ13825 339 aaKnown RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 GPR88Q9GZN0 384 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 C10orf88Q9H8K7 445 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 GGA1Q9UJY5 639 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 CALUO43852 315 aaPredicted RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 BANF1O75531 89 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 PTGER2P43116 358 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 MYL7Q01449 175 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 SP4Q02446 784 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 SPIRE1Q08AE8 756 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 IFI16Q16666 785 aaKnown RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 RINT1Q6NUQ1 792 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 TLCD1Q96CP7 247 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 CDC42EP4Q9H3Q1 356 aaKnown RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 DNAJC18Q9H819 358 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 FAM114A2Q9NRY5 505 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 DONSONQ9NYP3 566 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 USTQ9Y2C2 406 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 DDTLA6NHG4 134 aaPredicted RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 PPFIA2O75334 1257 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 JAM2P57087 298 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 GRAPQ13588 217 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 FAM178BQ8IXR5 827 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 FITM2Q8N6M3 262 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 SUPT20HQ8NEM7 779 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 GRAPLQ8TC17 118 aaPredicted RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 EDEM3Q9BZQ6 932 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 ACTR5Q9H9F9 607 aaPredicted RBP13.97□□□□□ -0.17
SNX1-201ENST00000261889 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
SNX1-201ENST00000261889 G3V3G9 751 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 CCDC188H7C350 402 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 CYP3A4P08684 503 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 PPP3CAQ08209 521 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 PASD1Q8IV76 773 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 IQCDQ96DY2 449 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 ZNF570Q96NI8 536 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 RAB17Q9H0T7 212 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.96□□□□□ -0.17
SNX1-201ENST00000261889 GOLGA8SH3BPF8 625 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 GOLGA8MH3BSY2 632 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 RIPK2O43353 540 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 VCAM1P19320 739 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 TARSP26639 723 aaKnown RBP13.96□□□□□ -0.17
SNX1-201ENST00000261889 GCKP35557 465 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 PPP4CP60510 307 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 NCALDP61601 193 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 AGBL2Q5U5Z8 902 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 HOOK3Q86VS8 718 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 SPATS2Q86XZ4 545 aaKnown RBP13.96□□□□□ -0.17
SNX1-201ENST00000261889 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.175e-7■■■■□ 20.8
SNX1-201ENST00000261889 SLITRK6Q9H5Y7 841 aa13.96□□□□□ -0.17
SNX1-201ENST00000261889 GSTTP1A0A1W2PQM5 241 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 CLK2P49760 499 aaKnown RBP13.96□□□□□ -0.18
SNX1-201ENST00000261889 KAZNQ674X7 775 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 FRMD5Q7Z6J6 570 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 CCDC50Q8IVM0 306 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 C4orf33Q8N1A6 199 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 KLF6Q99612 283 aaPredicted RBP13.96□□□□□ -0.18
SNX1-201ENST00000261889 LRRC27Q9C0I9 530 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 ZCWPW1Q9H0M4 648 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 KCNMB3Q9NPA1 279 aa13.96□□□□□ -0.18
SNX1-201ENST00000261889 TYW1Q9NV66 732 aaKnown RBP13.96□□□□□ -0.18
SNX1-201ENST00000261889 R3HDM2Q9Y2K5 976 aaKnown RBP13.96□□□□□ -0.18
SNX1-201ENST00000261889 ZMYM2Q9UBW7 1377 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 MMP10P09238 476 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 ECE1P42892 770 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 DNAJC3Q13217 504 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 CNGA2Q16280 664 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 ETNPPLQ8TBG4 499 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 RUBCNQ92622 972 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 LENG9Q96B70 501 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 HOMER2Q9NSB8 354 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 NKX1-2Q9UD57 310 aaPredicted RBP13.95□□□□□ -0.18
SNX1-201ENST00000261889 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 ABCB11O95342 1321 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 ESYT2A0FGR8 921 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 POC1B-GALNT4F8VUJ3 575 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 PPATQ06203 517 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 XRCC4Q13426 336 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 TMED2Q15363 201 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 RASGEF1CQ8N431 466 aa13.95□□□□□ -0.18
SNX1-201ENST00000261889 PI4K2BG5E9Z4 385 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 246.2 ms