RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 DCAF4L1Q3SXM0 396 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 CRIPAKQ8N1N5 446 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 KCNN1Q92952 543 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 CCDC47Q96A33 483 aaKnown RBP20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 ZNF689Q96CS4 500 aaPredicted RBP20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 HVCN1Q96D96 273 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 BICD1Q96G01 975 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 TCHPQ9BT92 498 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 TMEM117Q9H0C3 514 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 ST6GALNAC4Q9H4F1 302 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 ZNF576Q9H609 170 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 OLFML3Q9NRN5 406 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 HOOK1Q9UJC3 728 aaKnown RBP20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 PCDHB13Q9Y5F0 798 aa20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 LAMA2P24043 3122 aaKnown RBP20.59■□□□□ 0.89
CYSTM1-201ENST00000261811 ZNF202O95125 648 aa20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 LONRF3Q496Y0 759 aa20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 GLB1LQ6UWU2 654 aa20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 SFR1Q86XK3 245 aa20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 SP7Q8TDD2 431 aaPredicted RBP20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 MRPL9Q9BYD2 267 aaKnown RBP20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 EXOC7Q9UPT5 735 aa20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 TNFSF13BQ9Y275 285 aa20.58■□□□□ 0.89
CYSTM1-201ENST00000261811 PVALEFA0A1B0GWK0 134 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 FRMD3A2A2Y4 597 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 TBKBP1A7MCY6 615 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 ACTN4O43707 911 aaKnown RBP20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 NPTXRO95502 500 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 MATR3P43243 847 aaKnown RBP eCLIP20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 ZPBP2Q6X784 338 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 MRPL10Q7Z7H8 261 aaKnown RBP20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 ZNF598Q86UK7 904 aaKnown RBP20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 URGCPQ8TCY9 931 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 PAGE5Q96GU1 130 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 GBP4Q96PP9 640 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 TGS1Q96RS0 853 aaKnown RBP20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 ACO2Q99798 780 aaKnown RBP20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 PDZD7Q9H5P4 517 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 AAASQ9NRG9 546 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 TBX20Q9UMR3 447 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 IPPQ9Y573 584 aa20.57■□□□□ 0.88
CYSTM1-201ENST00000261811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 CARNS1A5YM72 827 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 GCNT3O95395 438 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 LIG4P49917 911 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 GTF2BQ00403 316 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 FAM160A1Q05DH4 1040 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 SPOUT1Q5T280 376 aaKnown RBP20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 NT5DC1Q5TFE4 455 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 KRBA2Q6ZNG9 492 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 UNC13DQ70J99 1090 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 ZNF720Q7Z2F6 126 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 TMEM87AQ8NBN3 555 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 EIF2AQ9BY44 585 aaKnown RBP20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 RSAD1Q9HA92 442 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 KANSL3Q9P2N6 904 aa20.56■□□□□ 0.88
CYSTM1-201ENST00000261811 LINC01553A4QN01 128 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 HNRNPDLO14979 420 aaKnown RBP20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 GTPBP6O43824 516 aaPredicted RBP20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 TOM1L1O75674 476 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 FGFR1P11362 822 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 NMT1P30419 496 aaKnown RBP20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 TAP1Q03518 808 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 COASYQ13057 564 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 ZNF568Q3ZCX4 644 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 PAN2Q504Q3 1202 aaKnown RBP20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 LRRC43Q8N309 656 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 DEFB123Q8N688 67 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 TARS2Q9BW92 718 aaKnown RBP20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 SEMA6BQ9H3T3 888 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 GOLPH3LQ9H4A5 285 aa20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 RC3H2Q9HBD1 1191 aaKnown RBP20.55■□□□□ 0.88
CYSTM1-201ENST00000261811 LCHNA4D1U4 455 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 GOLGA6L22H0YM25 854 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 RBAK-RBAKDNI3L0D1 243 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 CLDN3O15551 220 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 UBE2HP62256 183 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 MPZL3Q6UWV2 235 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 TAS1R3Q7RTX0 852 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 CDR2LQ86X02 465 aaPredicted RBP20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 HELQQ8TDG4 1101 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 ACCSQ96QU6 501 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 CCDC94Q9BW85 323 aaPredicted RBP20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 BLZF1Q9H2G9 400 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 TBC1D7Q9P0N9 293 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 GIT1Q9Y2X7 761 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 ZMYM2Q9UBW7 1377 aa20.54■□□□□ 0.88
CYSTM1-201ENST00000261811 MCF2P10911 925 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 ATF7P17544 494 aaPredicted RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 YARSP54577 528 aaKnown RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 ERVK-21P61565 698 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 RNASELQ05823 741 aaKnown RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 PSMD2Q13200 908 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 CUL4BQ13620 913 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 KYAT1Q16773 422 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 NOMO2Q5JPE7 1267 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 SLFN12LQ6IEE8 588 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 MAP4K3Q8IVH8 894 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 SYCP3Q8IZU3 236 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms