RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 ODF2LQ9ULJ1 636 aa20.83■□□□□ 0.92
SCARB1-201ENST00000261693 TRPC6Q9Y210 931 aa20.83■□□□□ 0.92
SCARB1-201ENST00000261693 UBE4BO95155 1302 aa20.83■□□□□ 0.92
SCARB1-201ENST00000261693 VIMP08670 466 aaKnown RBP20.82■□□□□ 0.92
SCARB1-201ENST00000261693 POLR2MP0CAP2 368 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 VAMP7P51809 220 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 BTNL9Q6UXG8 535 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 FAM228AQ86W67 206 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 FMNL3Q8IVF7 1028 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 SGSM3Q96HU1 749 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 ELAC2Q9BQ52 826 aaKnown RBP20.82■□□□□ 0.92
SCARB1-201ENST00000261693 PCYOX1Q9UHG3 505 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 PCDHA3Q9Y5H8 950 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 CCT8L1PA6NM43 557 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 KDM4CQ9H3R0 1056 aa20.82■□□□□ 0.92
SCARB1-201ENST00000261693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.82■□□□□ 0.921e-6■■■■■ 29.1
SCARB1-201ENST00000261693 CLUL1Q15846 466 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 C6orf118Q5T5N4 469 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 NOP9Q86U38 636 aaKnown RBP20.81■□□□□ 0.92
SCARB1-201ENST00000261693 KCTD17Q8N5Z5 321 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 ACER1Q8TDN7 264 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 ELMO3Q96BJ8 720 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-201ENST00000261693 TPX2Q9ULW0 747 aaKnown RBP20.81■□□□□ 0.92
SCARB1-201ENST00000261693 RBBP6Q7Z6E9 1792 aaKnown RBP20.81■□□□□ 0.92
SCARB1-201ENST00000261693 PODXLO00592 558 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 RIPK2O43353 540 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 SPOPO43791 374 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 PADI6Q6TGC4 694 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 NSMFQ6X4W1 530 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 OTUD6AQ7L8S5 288 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 SLC47A2Q86VL8 602 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 ANKS4BQ8N8V4 417 aa20.81■□□□□ 0.92
SCARB1-201ENST00000261693 A1CFQ9NQ94 594 aaKnown RBP20.81■□□□□ 0.92
SCARB1-201ENST00000261693 CYP26A1O43174 497 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 RTN2O75298 545 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 RARAP10276 462 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 CHRNB2P17787 502 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 HADHBP55084 474 aaKnown RBP20.8■□□□□ 0.92
SCARB1-201ENST00000261693 ADCY2Q08462 1091 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 CETN1Q12798 172 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 ZYXQ15942 572 aaKnown RBP20.8■□□□□ 0.92
SCARB1-201ENST00000261693 INTS8Q75QN2 995 aaKnown RBP20.8■□□□□ 0.92
SCARB1-201ENST00000261693 SLC9A9Q8IVB4 645 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 PLEKHO2Q8TD55 490 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 ANKRD31Q8N7Z5 1873 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 SRCAPQ6ZRS2 3230 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 GOLGA8IPA6NC78 632 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 GOLGA8JA6NMD2 632 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 RASGRF2O14827 1237 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 COILP38432 576 aaPredicted RBP20.8■□□□□ 0.92
SCARB1-201ENST00000261693 PDE4CQ08493 712 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 PPM1KQ8N3J5 372 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 MGARPQ8TDB4 240 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 CSRNP1Q96S65 589 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 DDX23Q9BUQ8 820 aaKnown RBP20.8■□□□□ 0.92
SCARB1-201ENST00000261693 NUP85Q9BW27 656 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 STRA6Q9BX79 667 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 ZBTB21Q9ULJ3 1066 aa20.8■□□□□ 0.92
SCARB1-201ENST00000261693 PFASO15067 1338 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 NRXN2Q9P2S2 1712 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 IPO5O00410 1097 aaKnown RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 AGTP01019 485 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 HSPA6P17066 643 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 RFX1P22670 979 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 XRCC4Q13426 336 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 AUHQ13825 339 aaKnown RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 LRRC14Q15048 493 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 FAM133BQ5BKY9 247 aaKnown RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 C1orf220Q5T0J3 134 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 EPS8L1Q8TE68 723 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 TMX4Q9H1E5 349 aaPredicted RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 GGT7Q9UJ14 662 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 SCN9AQ15858 1988 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 PPIP5K2O43314 1243 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 DLATP10515 647 aaKnown RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 E2F5Q15329 346 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 PPP1R7Q15435 360 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 LONRF1Q17RB8 773 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 EPC2Q52LR7 807 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 MSL1Q68DK7 614 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 PODNQ7Z5L7 613 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 COL23A1Q86Y22 540 aaPredicted RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 SLC13A5Q86YT5 568 aaPredicted RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 ZNF564Q8TBZ8 553 aaPredicted RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 RPS6KC1Q96S38 1066 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 TEKT3Q9BXF9 490 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 SAMD15Q9P1V8 674 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 CNOT7Q9UIV1 285 aaKnown RBP20.79■□□□□ 0.92
SCARB1-201ENST00000261693 CD2APQ9Y5K6 639 aa20.79■□□□□ 0.92
SCARB1-201ENST00000261693 FOXO6A8MYZ6 492 aa20.78■□□□□ 0.92
SCARB1-201ENST00000261693 ACSL3O95573 720 aa20.78■□□□□ 0.92
SCARB1-201ENST00000261693 NPR1P16066 1061 aa20.78■□□□□ 0.92
SCARB1-201ENST00000261693 SNX1Q13596 522 aa20.78■□□□□ 0.92
SCARB1-201ENST00000261693 NBPF9Q3BBW0 867 aa20.78■□□□□ 0.92
SCARB1-201ENST00000261693 HIBCHQ6NVY1 386 aaPredicted RBP20.78■□□□□ 0.92
SCARB1-201ENST00000261693 PIGWQ7Z7B1 504 aa20.78■□□□□ 0.92
SCARB1-201ENST00000261693 WDR11Q9BZH6 1224 aa20.78■□□□□ 0.92
SCARB1-201ENST00000261693 KCND2Q9NZV8 630 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms