RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 SPATA20Q8TB22 786 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 AGAP11Q8TF27 550 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 RBM15Q96T37 977 aaKnown RBP eCLIP17.28■□□□□ 0.363e-7■■■□□ 15.4
SREBF1-201ENST00000261646 UBXN6Q9BZV1 441 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 ZNF571Q7Z3V5 609 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-201ENST00000261646 FAM118BQ9BPY3 351 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 IQANK1A0A1B0GTG1 560 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 TMEM253P0C7T8 217 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 AP2B1P63010 937 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 ARHGAP4P98171 946 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 DDR1Q08345 913 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 EDRF1Q3B7T1 1238 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-201ENST00000261646 RGS9BPQ6ZS82 235 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 RFX6Q8HWS3 928 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 CALN1Q9BXU9 219 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 ABCF3Q9NUQ8 709 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 COPEO14579 308 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 PIK3CAP42336 1068 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 GRB10Q13322 594 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 ARHGAP18Q8N392 663 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 DNAI2Q9GZS0 605 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 CCDC22O60826 627 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 ITIH2P19823 946 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 KDSRQ06136 332 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 DMP1Q13316 513 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-201ENST00000261646 C11orf70Q9BRQ4 267 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 ADAM22Q9P0K1 906 aa17.27■□□□□ 0.36
SREBF1-201ENST00000261646 EMSYQ7Z589 1322 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 ZBTB5O15062 677 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 TMCO4Q5TGY1 634 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 RASSF3Q86WH2 238 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 CRLF3Q8IUI8 442 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 PASD1Q8IV76 773 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 ATL2Q8NHH9 583 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 TEKT1Q969V4 418 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 TTC25Q96NG3 672 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 THEGQ9P2T0 379 aa17.27■□□□□ 0.35
SREBF1-201ENST00000261646 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
SREBF1-201ENST00000261646 CFLARO15519 480 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 ASAP2O43150 1006 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 ATMINO43313 823 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-201ENST00000261646 SORBS3O60504 671 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 SNUPNO95149 360 aaKnown RBP17.26■□□□□ 0.35
SREBF1-201ENST00000261646 ANXA13P27216 316 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 PAPOLAP51003 745 aaKnown RBP17.26■□□□□ 0.35
SREBF1-201ENST00000261646 SLC26A7Q8TE54 656 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 NLRP7Q8WX94 980 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 TRAIPQ9BWF2 469 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 KRT81Q14533 505 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 MDH1BQ5I0G3 518 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 RABGAP1LQ5R372 815 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 DNAJC24Q6P3W2 148 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 SLC30A5Q8TAD4 765 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 THAP2Q9H0W7 228 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 TESPA1A2RU30 521 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-201ENST00000261646 CYP26A1O43174 497 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 DNAJC8O75937 253 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-201ENST00000261646 MYBP10242 640 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-201ENST00000261646 IRF2BP1Q8IU81 584 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 CD302Q8IX05 232 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 CYP4F11Q9HBI6 524 aa17.26■□□□□ 0.35
SREBF1-201ENST00000261646 PJA2O43164 708 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 SERPINB2P05120 415 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ARL4CP56559 192 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 QPCTQ16769 361 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ATG16L1Q676U5 607 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 RGL1Q9NZL6 768 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 RARGP13631 454 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 FMO5P49326 533 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 MTM1Q13496 603 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ANKRD20A2Q5SQ80 823 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ANKRD20A1Q5TYW2 823 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 TRIML2Q8N7C3 387 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 XXYLT1Q8NBI6 393 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 CFAP36Q96G28 342 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 CCDC17Q96LX7 622 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 KLF6Q99612 283 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-201ENST00000261646 REEP2Q9BRK0 252 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 WDR11Q9BZH6 1224 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ABCB11O95342 1321 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-201ENST00000261646 TJP3O95049 919 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ITGA8P53708 1063 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 RCN1Q15293 331 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ANKMY2Q8IV38 441 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 PPWD1Q96BP3 646 aaKnown RBP17.25■□□□□ 0.35
SREBF1-201ENST00000261646 MED15Q96RN5 788 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 APEX2Q9UBZ4 518 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 GGA2Q9UJY4 613 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ZCCHC18P0CG32 403 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 SAT1P21673 171 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ATP2B4P23634 1241 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 POLR2BP30876 1174 aaKnown RBP17.25■□□□□ 0.35
SREBF1-201ENST00000261646 COILP38432 576 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-201ENST00000261646 VAMP7P51809 220 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms