RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 ARL1P40616 181 aaPredicted RBP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 NPEPPSP55786 919 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 C21orf59P57076 290 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 THOC5Q13769 683 aaKnown RBP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 MTF1Q14872 753 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 RNF43Q68DV7 783 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 TMC5Q6UXY8 1006 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 CCDC125Q86Z20 511 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 OR9Q1Q8NGQ5 310 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 ACTRT1Q8TDG2 376 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 CCDC127Q96BQ5 260 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 ERP44Q9BS26 406 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 USTQ9Y2C2 406 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 HBS1LQ9Y450 684 aaKnown RBP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 PHRF1Q9P1Y6 1649 aaKnown RBP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 PLEKHG3A1L390 1219 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 ZPR1O75312 459 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 PSMC3P17980 439 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 RPL5P46777 297 aaKnown RBP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 FCHO2Q0JRZ9 810 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 ARHGAP44Q17R89 818 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 THEMIS2Q5TEJ8 643 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 C1orf228Q6PIY5 440 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 NELFCDQ8IXH7 590 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 SKA1Q96BD8 255 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 C1orf50Q9BV19 199 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 DDX47Q9H0S4 455 aaKnown RBP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 SNX25Q9H3E2 840 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 SLC39A2Q9NP94 309 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 GDF3Q9NR23 364 aa8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 PDS5AQ29RF7 1337 aaKnown RBP8.84□□□□□ -0.99
SNCAIP-201ENST00000261367 RAD51CO43502 376 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 RASSF9O75901 435 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 TSPAN9O75954 239 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 HSPA4LO95757 839 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 CARSP49589 748 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 GPC5P78333 572 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 CBX3Q13185 183 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 MFSD4BQ5TF39 518 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 ZFP1Q6P2D0 407 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 DTX3LQ8TDB6 740 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 KCNB2Q92953 911 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 SMYD3Q9H7B4 428 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 SUGCTQ9HAC7 445 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 ARPP21Q9UBL0 812 aaPredicted RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 CCPG1Q9ULG6 757 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 ARHGEF35A5YM69 484 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 GSNP06396 782 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 RFC5P40937 340 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 PTK2Q05397 1052 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 GCKRQ14397 625 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 CCDC137Q6PK04 289 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 SCUBE1Q8IWY4 988 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 C1orf112Q9NSG2 853 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 FAM153AQ9UHL3 310 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 DNAJC12Q9UKB3 198 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 ZHX2Q9Y6X8 837 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 CRYBG1Q9Y4K1 1723 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 SLC1A1P43005 524 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 FNTAP49354 379 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 USP11P51784 963 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 IGBP1P78318 339 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 RGS21Q2M5E4 152 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 IZUMO2Q6UXV1 221 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 ADAT2Q7Z6V5 191 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 MYCT1Q8N699 235 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 SCFD1Q8WVM8 642 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 TTC17Q96AE7 1141 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 PRR23AA6NEV1 266 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 B2RBV5 119 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 GOLGA8RI6L899 631 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 M0R3G1 203 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 NOP56O00567 594 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 GYPCP04921 128 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 NR2F2P24468 414 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 EPHB1P54762 984 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 TBX2Q13207 712 aaPredicted RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 SPIDRQ14159 915 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 TRADDQ15628 312 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 TMEM63BQ5T3F8 832 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 GUF1Q8N442 669 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 CNBD1Q8NA66 436 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 AGAP11Q8TF27 550 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 EME1Q96AY2 570 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 DGCR14Q96DF8 476 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 PRPF18Q99633 342 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 MOV10Q9HCE1 1003 aaKnown RBP8.83□□□□□ -1
SNCAIP-201ENST00000261367 MCM9Q9NXL9 1143 aa8.83□□□□□ -1
SNCAIP-201ENST00000261367 FGAP02671 866 aa8.82□□□□□ -1
SNCAIP-201ENST00000261367 ALDH5A1P51649 535 aaPredicted RBP8.82□□□□□ -1
SNCAIP-201ENST00000261367 PPARAQ07869 468 aa8.82□□□□□ -1
SNCAIP-201ENST00000261367 CYTH1Q15438 398 aa8.82□□□□□ -1
SNCAIP-201ENST00000261367 RSPH3Q86UC2 560 aa8.82□□□□□ -1
SNCAIP-201ENST00000261367 TLK2Q86UE8 772 aa8.82□□□□□ -1
SNCAIP-201ENST00000261367 TMPRSS6Q8IU80 811 aa8.82□□□□□ -1
SNCAIP-201ENST00000261367 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
SNCAIP-201ENST00000261367 SCG3Q8WXD2 468 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms