RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 GNGT1P63211 74 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 DRP2Q13474 957 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 TRADDQ15628 312 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 BMT2Q1RMZ1 405 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 C8orf74Q6P047 294 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 CNPY4Q8N129 248 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 IQCDQ96DY2 449 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 BTBD6Q96KE9 485 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 TMEM206Q9H813 350 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 AIPL1Q9NZN9 384 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 CTTNBP2NLQ9P2B4 639 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 COL2A1P02458 1487 aaPredicted RBP15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 NOP56O00567 594 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 SLC16A3O15427 465 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 GGPS1O95749 300 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 KCNA2P16389 499 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 ADSSP30520 456 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 TUBB4BP68371 445 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 HLTFQ14527 1009 aaKnown RBP eCLIP15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 SPOPLQ6IQ16 392 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.127e-10■■■■■ 45.9
TRAFD1-201ENST00000257604 TAS1R2Q8TE23 839 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 PPM1EQ8WY54 764 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 ARL8AQ96BM9 186 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 ZNF302Q9NR11 478 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 BRD2P25440 801 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 Q3C1V9 767 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 C4orf19Q8IY42 314 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 LNX1Q8TBB1 728 aaPredicted RBP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 CTNNBL1Q8WYA6 563 aaPredicted RBP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 THAP2Q9H0W7 228 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 CYP26B1Q9NR63 512 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 AARSP49588 968 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 IRAK1P51617 712 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 GUCY2DQ02846 1103 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 NAB2Q15742 525 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 GPR162Q16538 588 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 FBXO16Q8IX29 292 aaPredicted RBP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 TATDN2Q93075 761 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 TARS2Q9BW92 718 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 TMEM117Q9H0C3 514 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 SGPL1O95470 568 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 SFNP31947 248 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 GJC1P36383 396 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 INTS8Q75QN2 995 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 RPUSD2Q8IZ73 545 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 TMEM161BQ8NDZ6 487 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 DEPTORQ8TB45 409 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 NEK9Q8TD19 979 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 SEMA4DQ92854 862 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 FNBP1Q96RU3 617 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 TXNRD2Q9NNW7 524 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 KCNG1Q9UIX4 513 aa15.81■□□□□ 0.12
TRAFD1-201ENST00000257604 ATP2C2O75185 946 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 KRT14P02533 472 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 POTEJP0CG39 1038 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 CFAP221Q4G0U5 840 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 ZNF394Q53GI3 561 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 ZBTB41Q5SVQ8 909 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 MIS18BP1Q6P0N0 1132 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 SLC47A2Q86VL8 602 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 PASD1Q8IV76 773 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 ARHGEF26Q96DR7 871 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 TUBBP07437 444 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 FERP16591 822 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 MESDQ14696 234 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 AADACL2Q6P093 401 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 SLC7A3Q8WY07 619 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 KAT2BQ92831 832 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 BORCS6Q96GS4 357 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 EDEM3Q9BZQ6 932 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 ASCC2Q9H1I8 757 aaPredicted RBP15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 IGSF9BQ9UPX0 1349 aa15.8■□□□□ 0.12
TRAFD1-201ENST00000257604 YBX3P16989 372 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■■■■□ 20.1
TRAFD1-201ENST00000257604 TCP1P17987 556 aaKnown RBP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 STRN3Q13033 797 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 ZFYVE27Q5T4F4 411 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 MAP1SQ66K74 1059 aaPredicted RBP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 TADA2BQ86TJ2 420 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 MSL3Q8N5Y2 521 aaKnown RBP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 REPS2Q8NFH8 660 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 SLC35G2Q8TBE7 412 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 NLRP4Q96MN2 994 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 STK33Q9BYT3 514 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 SPATC1LQ9H0A9 340 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 DDX47Q9H0S4 455 aaKnown RBP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 VIPAS39Q9H9C1 493 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 EPB41L5Q9HCM4 733 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 XPNPEP1Q9NQW7 623 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 K7ERI5 159 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 FTLP02792 175 aaPredicted RBP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 IREB2P48200 963 aaKnown RBP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 MNAT1P51948 309 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 EMC2Q15006 297 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 LLGL2Q6P1M3 1020 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 CPNE8Q86YQ8 564 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 TSEN2Q8NCE0 465 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms