RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 DCTN3O75935 186 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 ITGA8P53708 1063 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PTENP60484 403 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 USP4Q13107 963 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PARP10Q53GL7 1025 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
USP30-201ENST00000257548 SYT2Q8N9I0 419 aaPredicted RBP13.17□□□□□ -0.3
USP30-201ENST00000257548 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
USP30-201ENST00000257548 ALG3Q92685 438 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 MKNK1Q9BUB5 465 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 MYLK2Q9H1R3 596 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PHTF1Q9UMS5 762 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PI4K2BG5E9Z4 385 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 TRPA1O75762 1119 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 RARAP10276 462 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 FGFR2P21802 821 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 MTDHQ86UE4 582 aaKnown RBP13.17□□□□□ -0.3
USP30-201ENST00000257548 PALM2Q8IXS6 379 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 SLC20A1Q8WUM9 679 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 SYNCQ9H7C4 482 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PPARGC1AQ9UBK2 798 aaKnown RBP13.17□□□□□ -0.3
USP30-201ENST00000257548 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 K7ENM7 598 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 FOXN3O00409 490 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 PSMC6P62333 389 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 GPC5P78333 572 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 TAF1BQ53T94 588 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 PASD1Q8IV76 773 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 PLA2G12BQ9BX93 195 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 TYW1Q9NV66 732 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 ATXN2Q99700 1313 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 HAUS5O94927 633 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 PECAM1P16284 738 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 GRAMD1BQ3KR37 738 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 LACTB2Q53H82 288 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 OLFML2BQ68BL8 750 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 CARD9Q9H257 536 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 DHX36Q9H2U1 1008 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 CTDP1Q9Y5B0 961 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 CYP26A1O43174 497 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 CREB3O43889 395 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 ATP9AO75110 1047 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 THOC5Q13769 683 aaKnown RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 PDE1CQ14123 709 aaPredicted RBP13.16□□□□□ -0.3
USP30-201ENST00000257548 TMEM132AQ24JP5 1023 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 C12orf60Q5U649 245 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 ZBED8Q8IZ13 594 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 SLC25A41Q8N5S1 370 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 SHCBP1LQ9BZQ2 653 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 VCX3BQ9H321 246 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 VCX3AQ9NNX9 186 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 AIPL1Q9NZN9 384 aa13.16□□□□□ -0.3
USP30-201ENST00000257548 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 SGK1O00141 431 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 PYGMP11217 842 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 CALB2P22676 271 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 SCNN1DP51172 638 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 TRAF1Q13077 416 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 MAP7Q14244 749 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 BBS9Q3SYG4 887 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 RHOT2Q8IXI1 618 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 RBM15Q96T37 977 aaKnown RBP eCLIP13.15□□□□□ -0.3
USP30-201ENST00000257548 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 COL5A2P05997 1499 aaPredicted RBP13.15□□□□□ -0.3
USP30-201ENST00000257548 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
USP30-201ENST00000257548 CDH16O75309 829 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 RARGP13631 454 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 MARK3P27448 753 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 MMP13P45452 471 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 SPATA24Q86W54 205 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 SYN2Q92777 582 aaPredicted RBP13.15□□□□□ -0.3
USP30-201ENST00000257548 PGM2Q96G03 612 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 RNPEPL1Q9HAU8 725 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 NKX1-2Q9UD57 310 aaPredicted RBP13.15□□□□□ -0.3
USP30-201ENST00000257548 NAALADL1Q9UQQ1 740 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 PCNTO95613 3336 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 MYO3BQ8WXR4 1341 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 PITPNM2Q9BZ72 1349 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 TCRBV7S2A1N4TA0A589 114 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms