RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 A0A0U1RQG5 324 aaPredicted RBP27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 DDNO94850 711 aaPredicted RBP27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 ATP4AP20648 1035 aa27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 ABCB4P21439 1286 aa27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 AARSP49588 968 aaKnown RBP eCLIP27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 ALDH5A1P51649 535 aaPredicted RBP27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 RNASE9P60153 205 aaKnown RBP27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 RIOX2Q8IUF8 465 aa27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 ACTRT1Q8TDG2 376 aa27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 ZNF526Q8TF50 670 aaPredicted RBP27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 FBXO40Q9UH90 709 aa27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 MAFBQ9Y5Q3 323 aaPredicted RBP27.24■■□□□ 1.95
TMEM55B-201ENST00000250489 ZC3H4Q9UPT8 1303 aaKnown RBP27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 SBF1O95248 1867 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 ANKRD62A6NC57 917 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 GARTP22102 1010 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 CYP24A1Q07973 514 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 BRDTQ58F21 947 aaPredicted RBP27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 METTL13Q8N6R0 699 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 ZBTB9Q96C00 473 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 ARHGEF26Q96DR7 871 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 KREMEN1Q96MU8 473 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 ZNF302Q9NR11 478 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 ADARB2Q9NS39 739 aaKnown RBP27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 CSADQ9Y600 493 aa27.23■■□□□ 1.95
TMEM55B-201ENST00000250489 ADM5C9JUS6 153 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 H0YCG3 227 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 HNRNPDLO14979 420 aaKnown RBP27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 BUB1BO60566 1050 aaPredicted RBP27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 PPATQ06203 517 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 EMC2Q15006 297 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 FAM71AQ8IYT1 594 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 CCDC102AQ96A19 550 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 KRT12Q99456 494 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 POP1Q99575 1024 aaKnown RBP27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 THAP2Q9H0W7 228 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 MED4Q9NPJ6 270 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 CEP104O60308 925 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 SEPT14Q6ZU15 432 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 GPD1LQ8N335 351 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 FAM71BQ8TC56 605 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 HES6Q96HZ4 224 aa27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 TOPORSQ9NS56 1045 aaPredicted RBP27.22■■□□□ 1.95
TMEM55B-201ENST00000250489 MYH9P35579 1960 aaKnown RBP27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 OATP04181 439 aa27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 GTF2H1P32780 548 aa27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 GPC3P51654 580 aa27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 TNNC1P63316 161 aa27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 HSP90B2PQ58FF3 399 aa27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 PPM1KQ8N3J5 372 aa27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 GDF3Q9NR23 364 aa27.21■■□□□ 1.95
TMEM55B-201ENST00000250489 GLI1P08151 1106 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 ABCD1P33897 745 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 POLGP54098 1239 aaPredicted RBP27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 MFAP3P55082 362 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 ENPEPQ07075 957 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 USP37Q86T82 979 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 RPUSD2Q8IZ73 545 aaKnown RBP27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 SCFD2Q8WU76 684 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 SHC3Q92529 594 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 DCPSQ96C86 337 aaKnown RBP27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 ISCUQ9H1K1 167 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.2■■□□□ 1.953e-6■■■■■ 94.9
TMEM55B-201ENST00000250489 AMFRQ9UKV5 643 aa27.2■■□□□ 1.95
TMEM55B-201ENST00000250489 HEXIM1O94992 359 aaKnown RBP27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 SGPL1O95470 568 aa27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 USP8P40818 1118 aa27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 EPHB4P54760 987 aa27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 SND1Q7KZF4 910 aaKnown RBP eCLIP27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 IFT20Q8IY31 132 aa27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 EPS8L1Q8TE68 723 aa27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 BICD1Q96G01 975 aa27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 KCNG1Q9UIX4 513 aa27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 NOCTQ9UK39 431 aaKnown RBP27.2■■□□□ 1.94
TMEM55B-201ENST00000250489 PGRMC1O00264 195 aaKnown RBP27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 TULP1O00294 542 aaPredicted RBP27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 EDNRBP24530 442 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 GYS2P54840 703 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 GADL1Q6ZQY3 521 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 SULF1Q8IWU6 871 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 RASGEF1CQ8N431 466 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 FBXL13Q8NEE6 735 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 HELQQ8TDG4 1101 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 TAS1R2Q8TE23 839 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.19■■□□□ 1.943e-6■□□□□ 9.1
TMEM55B-201ENST00000250489 SPATC1LQ9H0A9 340 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 VPS18Q9P253 973 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 FAN1Q9Y2M0 1017 aa27.19■■□□□ 1.94
TMEM55B-201ENST00000250489 IGKV6D-21A0A0A0MT36 114 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 SOWAHBA6NEL2 793 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 CHRNB2P17787 502 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 UBA1P22314 1058 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 EMBQ6PCB8 327 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 NOP9Q86U38 636 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 CALR3Q96L12 384 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 ZMYND15Q9H091 742 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 DHX33Q9H6R0 707 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 RAB20Q9NX57 234 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 COG5Q9UP83 839 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms