RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PDZD7Q9H5P4 517 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 ALG13Q9NP73 1137 aaKnown RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 BLOC1S4Q9NUP1 217 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 KANSL3Q9P2N6 904 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 CCDC39Q9UFE4 941 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 GIT1Q9Y2X7 761 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 MYO7AQ13402 2215 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 TCHHQ07283 1943 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 FSD2A1L4K1 749 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 H0YCG3 227 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 PLS3P13797 630 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 CAMK1Q14012 370 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 SKIV2LQ15477 1246 aaKnown RBP14.07□□□□□ -0.16
VPREB3-201ENST00000248948 AAK1Q2M2I8 961 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 PDE12Q6L8Q7 609 aaKnown RBP14.07□□□□□ -0.16
VPREB3-201ENST00000248948 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 SLC39A11Q8N1S5 342 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 LRRC15Q8TF66 581 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
VPREB3-201ENST00000248948 NTPCRQ9BSD7 190 aaKnown RBP14.07□□□□□ -0.16
VPREB3-201ENST00000248948 NXF3Q9H4D5 531 aaKnown RBP14.07□□□□□ -0.16
VPREB3-201ENST00000248948 KMT5AQ9NQR1 393 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 TLR9Q9NR96 1032 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 LARSQ9P2J5 1176 aaKnown RBP14.07□□□□□ -0.16
VPREB3-201ENST00000248948 INPP5FQ9Y2H2 1132 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 CUL9Q8IWT3 2517 aa14.07□□□□□ -0.16
VPREB3-201ENST00000248948 VCANP13611 3396 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 CCDC169A6NNP5 214 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 K7ERI5 159 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 SPTLC2O15270 562 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 NCK2O43639 380 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
VPREB3-201ENST00000248948 NPTXRO95502 500 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 EDN1P05305 212 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 DNAJB1P25685 340 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 MLH1P40692 756 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
VPREB3-201ENST00000248948 ZNF131P52739 623 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 SMTNP53814 917 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 BCAR1P56945 870 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 RNASELQ05823 741 aaKnown RBP14.06□□□□□ -0.16
VPREB3-201ENST00000248948 BECN1Q14457 450 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 TMEM132AQ24JP5 1023 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 ARSHQ5FYA8 562 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 TCEAL5Q5H9L2 206 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 CCDC73Q6ZRK6 1079 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 KCNG4Q8TDN1 519 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 HLA-CQ95604 372 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 EPSTI1Q96J88 318 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 REEP2Q9BRK0 252 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 TMEM175Q9BSA9 504 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 MRPL4Q9BYD3 311 aaKnown RBP14.06□□□□□ -0.16
VPREB3-201ENST00000248948 PRDM6Q9NQX0 595 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 SPG21Q9NZD8 308 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 STK39Q9UEW8 545 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 TNFSF13BQ9Y275 285 aa14.06□□□□□ -0.16
VPREB3-201ENST00000248948 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 FSCN2O14926 492 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 ABCD1P33897 745 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 NCKAP1LP55160 1127 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 MRPS5P82675 430 aaKnown RBP14.05□□□□□ -0.16
VPREB3-201ENST00000248948 KRT17Q04695 432 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 GRIK3Q13003 919 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 PKP1Q13835 747 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 LONRF3Q496Y0 759 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 TJAP1Q5JTD0 557 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 ATF7IP2Q5U623 682 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 PABPC5Q96DU9 382 aaKnown RBP14.05□□□□□ -0.16
VPREB3-201ENST00000248948 TMEM169Q96HH4 297 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 NRDE2Q9H7Z3 1164 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 UBE2ZQ9H832 354 aaPredicted RBP14.05□□□□□ -0.16
VPREB3-201ENST00000248948 PARVGQ9HBI0 331 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 PUF60Q9UHX1 559 aaKnown RBP14.05□□□□□ -0.16
VPREB3-201ENST00000248948 HES2Q9Y543 173 aa14.05□□□□□ -0.16
VPREB3-201ENST00000248948 ANK1P16157 1881 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 CUTAO60888 179 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 TBCAO75347 108 aaKnown RBP14.04□□□□□ -0.16
VPREB3-201ENST00000248948 FAM13AO94988 1023 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 MAPTP10636 758 aaKnown RBP14.04□□□□□ -0.16
VPREB3-201ENST00000248948 IRS1P35568 1242 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 PBX3P40426 434 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 DSC1Q08554 894 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 RAD51AP2Q09MP3 1159 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 STRN3Q13033 797 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 MCM6Q14566 821 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 ZNF568Q3ZCX4 644 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 SPECC1Q5M775 1068 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 RRAGBQ5VZM2 374 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 ZPBP2Q6X784 338 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 TAS1R3Q7RTX0 852 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 CDR2LQ86X02 465 aaPredicted RBP14.04□□□□□ -0.16
VPREB3-201ENST00000248948 TMEM161BQ8NDZ6 487 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 ASB2Q96Q27 587 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 RPS6KC1Q96S38 1066 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 GAD1Q99259 594 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms