RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TMEM143Q96AN5 459 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 CELF4Q9BZC1 486 aaKnown RBP17.03■□□□□ 0.32
LRFN1-201ENST00000248668 AMACRQ9UHK6 382 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 AMFRQ9UKV5 643 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 NR2E1Q9Y466 385 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 HIRAP54198 1017 aaPredicted RBP17.03■□□□□ 0.32
LRFN1-201ENST00000248668 NCKAP1LP55160 1127 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 ACTR2P61160 394 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 SP2Q02086 613 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 EPC2Q52LR7 807 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 SLC39A4Q6P5W5 647 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 GOLGA6L1Q8N7Z2 621 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 KREMEN1Q96MU8 473 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 FAM213AQ9BRX8 229 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 PGRMC1O00264 195 aaKnown RBP17.02■□□□□ 0.32
LRFN1-201ENST00000248668 KCTD16Q68DU8 428 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 TTC19Q6DKK2 380 aaPredicted RBP17.02■□□□□ 0.32
LRFN1-201ENST00000248668 PHLDB2Q86SQ0 1253 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 CPNE8Q86YQ8 564 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 LMBR1Q8WVP7 490 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 KLRG1Q96E93 195 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 BTBD6Q96KE9 485 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 SYT11Q9BT88 431 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 TEX13BQ9BXU2 312 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 GEMIN8Q9NWZ8 242 aaKnown RBP17.02■□□□□ 0.32
LRFN1-201ENST00000248668 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 CLGNO14967 610 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 FGGP02679 453 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 AARSP49588 968 aaKnown RBP eCLIP17.02■□□□□ 0.32
LRFN1-201ENST00000248668 ALCAMQ13740 583 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
LRFN1-201ENST00000248668 AFAP1L1Q8TED9 768 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 RUFY1Q96T51 708 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 PCDHB18PQ96TA0 734 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 ACAD9Q9H845 621 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 ANKEF1Q9NU02 776 aa17.02■□□□□ 0.32
LRFN1-201ENST00000248668 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.32
LRFN1-201ENST00000248668 SART1O43290 800 aaKnown RBP17.02■□□□□ 0.31
LRFN1-201ENST00000248668 CCDC172P0C7W6 258 aa17.02■□□□□ 0.31
LRFN1-201ENST00000248668 ERVK-9P63128 1117 aa17.02■□□□□ 0.31
LRFN1-201ENST00000248668 OTUD6AQ7L8S5 288 aa17.02■□□□□ 0.31
LRFN1-201ENST00000248668 NOP9Q86U38 636 aaKnown RBP17.02■□□□□ 0.31
LRFN1-201ENST00000248668 XPNPEP1Q9NQW7 623 aa17.02■□□□□ 0.31
LRFN1-201ENST00000248668 MAP3K20Q9NYL2 800 aaKnown RBP17.02■□□□□ 0.31
LRFN1-201ENST00000248668 SPDYE16A6NNV3 312 aaPredicted RBP17.01■□□□□ 0.31
LRFN1-201ENST00000248668 KRT14P02533 472 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 TMEM253P0C7T8 217 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 ANKRD35Q8N283 1001 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 ATP6V0A1Q93050 837 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 TATDN2Q93075 761 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 GPRASP2Q96D09 838 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 PBKQ96KB5 322 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
LRFN1-201ENST00000248668 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
LRFN1-201ENST00000248668 MMEP08473 750 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
LRFN1-201ENST00000248668 KIF22Q14807 665 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 PARD3BQ8TEW8 1205 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 ARL8AQ96BM9 186 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 GDF3Q9NR23 364 aa17.01■□□□□ 0.31
LRFN1-201ENST00000248668 PSAPP07602 524 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 HARSP12081 509 aaKnown RBP17■□□□□ 0.31
LRFN1-201ENST00000248668 MARCKSL1P49006 195 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 MESDQ14696 234 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 DCAF12L1Q5VU92 463 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 CATSPERGQ6ZRH7 1159 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 MAP4K3Q8IVH8 894 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 FAM212AQ96EL1 285 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 DPH5Q9H2P9 285 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 EXOC7Q9UPT5 735 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 STXBP5LQ9Y2K9 1186 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 COL11A1P12107 1806 aaPredicted RBP17■□□□□ 0.31
LRFN1-201ENST00000248668 GOLGA6CA6NDK9 693 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 GOLGA6DP0CG33 693 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 KRT5P13647 590 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 SSTR3P32745 418 aaPredicted RBP17■□□□□ 0.31
LRFN1-201ENST00000248668 PSEN1P49768 467 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 PAK2Q13177 524 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 GLE1Q53GS7 698 aaKnown RBP17■□□□□ 0.31
LRFN1-201ENST00000248668 EMBQ6PCB8 327 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 SYCE1Q8N0S2 351 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 SH2D3CQ8N5H7 860 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
LRFN1-201ENST00000248668 ZIM3Q96PE6 472 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 MYCBPQ99417 103 aaPredicted RBP17■□□□□ 0.31
LRFN1-201ENST00000248668 GOLGA6AQ9NYA3 693 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 ZNF112Q9UJU3 913 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 KIAA1217Q5T5P2 1943 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 HSF2BPO75031 334 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 ACOT2P49753 483 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 SEZ6Q53EL9 994 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 SLFN11Q7Z7L1 901 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 PAGR1Q9BTK6 254 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 R3HDMLQ9H3Y0 253 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 CYP26B1Q9NR63 512 aa17■□□□□ 0.31
LRFN1-201ENST00000248668 SUCLA2Q9P2R7 463 aaPredicted RBP17■□□□□ 0.31
LRFN1-201ENST00000248668 TTI1O43156 1089 aa16.99■□□□□ 0.31
LRFN1-201ENST00000248668 ANXA13P27216 316 aa16.99■□□□□ 0.31
LRFN1-201ENST00000248668 MYBPC2Q14324 1141 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms