RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 WDR60Q8WVS4 1066 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 CLMNQ96JQ2 1002 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 BTBD6Q96KE9 485 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 C12orf65Q9H3J6 166 aaKnown RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 AJAP1Q9UKB5 411 aaPredicted RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 TDRKHQ9Y2W6 561 aaKnown RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 PITPNM2Q9BZ72 1349 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 ANKRD62A6NC57 917 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 C2orf71A6NGG8 1288 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 ZBED4O75132 1171 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 WFS1O76024 890 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 CA4P22748 312 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 COG7P83436 770 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 MAP7Q14244 749 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 PPP2R5BQ15173 497 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 KRT79Q5XKE5 535 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 PHLDB2Q86SQ0 1253 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 TXLNGYQ9BZA5 131 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 FLT1P17948 1338 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 PPP1R2P41236 205 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 GALK1P51570 392 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 COASYQ13057 564 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 GRB10Q13322 594 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 PUM3Q15397 648 aaKnown RBP19.55■□□□□ 0.72
PTPN12-201ENST00000248594 SDCCAG8Q86SQ7 713 aaPredicted RBP19.55■□□□□ 0.72
PTPN12-201ENST00000248594 NLRP10Q86W26 655 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 CCDC125Q86Z20 511 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 ATL2Q8NHH9 583 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 ATG4AQ8WYN0 398 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 CENPKQ9BS16 269 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 KCNQ5Q9NR82 932 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 TAS2R14Q9NYV8 317 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 GJC1P36383 396 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 ZCWPW2Q504Y3 356 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 SPATA24Q86W54 205 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 FAM136AQ96C01 138 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 MMTAG2Q9BU76 263 aaKnown RBP19.55■□□□□ 0.72
PTPN12-201ENST00000248594 SPATA16Q9BXB7 569 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 THAP2Q9H0W7 228 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 BLOC1S4Q9NUP1 217 aa19.55■□□□□ 0.72
PTPN12-201ENST00000248594 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.55■□□□□ 0.72
PTPN12-201ENST00000248594 SMCO2A6NFE2 343 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 SPOPO43791 374 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 MAGEA8P43361 318 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 RRP1BQ14684 758 aaKnown RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 NONOQ15233 471 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 CALCRLQ16602 461 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 C4orf50Q6ZRC1 276 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 NLRP9Q7RTR0 991 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PIGBQ92521 554 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 HAUS1Q96CS2 278 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 NAALADL1Q9UQQ1 740 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 T-ENOLP0DO92 83 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 POU5F1Q01860 360 aaKnown RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 SLC34A1Q06495 639 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 SEL1L2Q5TEA6 688 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 RNF43Q68DV7 783 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 NSMFQ6X4W1 530 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 MAP7D3Q8IWC1 876 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 RBM12BQ8IXT5 1001 aaKnown RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 TAB3Q8N5C8 712 aaPredicted RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PRELID2Q8N945 189 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 ZBTB38Q8NAP3 1195 aaPredicted RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PTPRN2Q92932 1015 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 ANKRD27Q96NW4 1050 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 KLF6Q99612 283 aaPredicted RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 SEC63Q9UGP8 760 aaKnown RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 GOLGA8RI6L899 631 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 EXOC3O60645 756 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 RARGP13631 454 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 ATP5DP30049 168 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 TNNI2P48788 182 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PNMA1Q8ND90 353 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 WDR66Q8TBY9 1149 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 CADM1Q9BY67 442 aaKnown RBP19.54■□□□□ 0.72
PTPN12-201ENST00000248594 CCDC134Q9H6E4 229 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 GCNT4Q9P109 453 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 ARMCX1Q9P291 453 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PDP2Q9P2J9 529 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PRKAG3Q9UGI9 489 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PHF24Q9UPV7 400 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 USP20Q9Y2K6 914 aa19.54■□□□□ 0.72
PTPN12-201ENST00000248594 PASKQ96RG2 1323 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 E9PMD0 336 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 CETPP11597 493 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 TNFAIP3P21580 790 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 PIK3CAP42336 1068 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 TFAP4Q01664 338 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 PARP6Q2NL67 630 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 MAGEB18Q96M61 343 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 MIPEPQ99797 713 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 USP17L3A6NCW0 530 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 USP17L4A6NCW7 530 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 FAM187AA6NFU0 413 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 ADCY8P40145 1251 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 USP17L1Q7RTZ2 530 aa19.53■□□□□ 0.72
PTPN12-201ENST00000248594 ZNF184Q99676 751 aaPredicted RBP19.53■□□□□ 0.72
PTPN12-201ENST00000248594 EDEM3Q9BZQ6 932 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms