RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 PITPNM2Q9BZ72 1349 aa18.11■□□□□ 0.49
SGPP1-201ENST00000247225 ROBO3Q96MS0 1386 aa18.11■□□□□ 0.49
SGPP1-201ENST00000247225 A0A1B0GUA9 196 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 RIPK2O43353 540 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 PHF2O75151 1096 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 ECEL1O95672 775 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 SMARCA1P28370 1054 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 DPY19L2P1Q6NXN4 242 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 PCDHB18PQ96TA0 734 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 ZNF577Q9BSK1 485 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 TDRD3Q9H7E2 651 aaKnown RBP18.1■□□□□ 0.49
SGPP1-201ENST00000247225 CHST7Q9NS84 486 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 A0A1B0GUL6 1792 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 SOX10P56693 466 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 SPIRE1Q08AE8 756 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 SYDE2Q5VT97 1194 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 TAOK1Q7L7X3 1001 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 SLFN11Q7Z7L1 901 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 ALG13Q9NP73 1137 aaKnown RBP18.1■□□□□ 0.49
SGPP1-201ENST00000247225 HOMER3Q9NSC5 361 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 SLC16A4O15374 487 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 GJB6O95452 261 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
SGPP1-201ENST00000247225 BFSP1Q12934 665 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 ABCB5Q2M3G0 1257 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 ADAM7Q9H2U9 754 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 GRHL1Q9NZI5 618 aa18.1■□□□□ 0.49
SGPP1-201ENST00000247225 CLRN2A0PK11 232 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 GOLGA8SH3BPF8 625 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 GOLGA8MH3BSY2 632 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 SLC8A1P32418 973 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 PLCB3Q01970 1234 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 GABPAQ06546 454 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 ATXN2LQ8WWM7 1075 aaKnown RBP18.09■□□□□ 0.49
SGPP1-201ENST00000247225 CPA5Q8WXQ8 436 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 SPOCK2Q92563 424 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 ZNF317Q96PQ6 595 aaPredicted RBP18.09■□□□□ 0.49
SGPP1-201ENST00000247225 TMEM237Q96Q45 408 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 TGS1Q96RS0 853 aaKnown RBP18.09■□□□□ 0.49
SGPP1-201ENST00000247225 ANAPC7Q9UJX3 599 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 PASKQ96RG2 1323 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 PI4K2BG5E9Z4 385 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 YY1P25490 414 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 COILP38432 576 aaPredicted RBP18.09■□□□□ 0.49
SGPP1-201ENST00000247225 ADCY2Q08462 1091 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 TLCD1Q96CP7 247 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 ZSWIM1Q9BR11 485 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 LXNQ9BS40 222 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 DNAJC18Q9H819 358 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 ETNK1Q9HBU6 452 aa18.09■□□□□ 0.49
SGPP1-201ENST00000247225 TCP10L2B9ZVM9 353 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 PPIP5K2O43314 1243 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 SUN1O94901 812 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 IFNB1P01574 187 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 KRT16P08779 473 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 NEFHP12036 1026 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 VCAM1P19320 739 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 PEX3P56589 373 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 POU5F1Q01860 360 aaKnown RBP18.08■□□□□ 0.49
SGPP1-201ENST00000247225 SYCP2LQ5T4T6 812 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 ZNF720Q7Z2F6 126 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 ACSF2Q96CM8 615 aaPredicted RBP18.08■□□□□ 0.49
SGPP1-201ENST00000247225 WDR18Q9BV38 432 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 FBXO28Q9NVF7 368 aa18.08■□□□□ 0.49
SGPP1-201ENST00000247225 PFASO15067 1338 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 BMP3P12645 472 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 GCKP35557 465 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 PPATQ06203 517 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 DRP2Q13474 957 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 CNGA2Q16280 664 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 NOP9Q86U38 636 aaKnown RBP18.08■□□□□ 0.48
SGPP1-201ENST00000247225 NKIRAS1Q9NYS0 192 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 STRCP1A6NGW2 1772 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 ENO4A6NNW6 628 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 CHRNA3P32297 505 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 PDE6CP51160 858 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 VAMP7P51809 220 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 MIGA2Q7L4E1 593 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 ERICH1Q86X53 443 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 CYP4X1Q8N118 509 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 C4orf33Q8N1A6 199 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 SLC5A5Q92911 643 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 LENG9Q96B70 501 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 SPDL1Q96EA4 605 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 KDM4CQ9H3R0 1056 aa18.08■□□□□ 0.48
SGPP1-201ENST00000247225 MMP13P45452 471 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 CRKP46108 304 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 DNAJC3Q13217 504 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 FAM102BQ5T8I3 360 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 SLC13A5Q86YT5 568 aaPredicted RBP18.07■□□□□ 0.48
SGPP1-201ENST00000247225 ACER1Q8TDN7 264 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.07■□□□□ 0.48
SGPP1-201ENST00000247225 USP15Q9Y4E8 981 aaPredicted RBP18.07■□□□□ 0.48
SGPP1-201ENST00000247225 FAM187AA6NFU0 413 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 PDHA1P08559 390 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 KRT15P19012 456 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 MXI1P50539 228 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 ITGA8P53708 1063 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 HYIQ5T013 277 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms