RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TYW5A2RUC4 315 aaKnown RBP11.74□□□□□ -0.53
COPA-201ENST00000241704 ZNF233A6NK53 670 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 SLC26A4O43511 780 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 FNTAP49354 379 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 RPS6KA3P51812 740 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 TRPM8Q7Z2W7 1104 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 RPF1Q9H9Y2 349 aaKnown RBP11.74□□□□□ -0.53
COPA-201ENST00000241704 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 XRN1Q8IZH2 1706 aaKnown RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 A0A1W2PQC6 194 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 C6orf222P0C671 652 aaPredicted RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 TXNP10599 105 aaKnown RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 STX2P32856 288 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 RAD23BP54727 409 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 AMPD2Q01433 879 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 MAPK6Q16659 721 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 DSTYKQ6XUX3 929 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 ILDR1Q86SU0 546 aaPredicted RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 TRIM50Q86XT4 487 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 ARHGAP18Q8N392 663 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 ANKRD42Q8N9B4 389 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 XXYLT1Q8NBI6 393 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 PSPC1Q8WXF1 523 aaKnown RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 SLITRK6Q9H5Y7 841 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 PCDHB4Q9Y5E5 795 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 PEAK1Q9H792 1746 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 FANCGO15287 622 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 RNF8O76064 485 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 RHOBTB3O94955 611 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 ROR2Q01974 943 aaKnown RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 PHLDB3Q6NSJ2 640 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 MCUR1Q96AQ8 359 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 MTIF3Q9H2K0 278 aaKnown RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 TOPORSQ9NS56 1045 aaPredicted RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 USH1CQ9Y6N9 552 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 GRID2IPA4D2P6 1211 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 KCNH2Q12809 1159 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 HADHQ16836 314 aaKnown RBP11.73□□□□□ -0.53
COPA-201ENST00000241704 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 ADSSL1Q8N142 457 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 KLHL23Q8NBE8 558 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 CEP72Q9P209 647 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 L3MBTL1Q9Y468 752 aa11.73□□□□□ -0.53
COPA-201ENST00000241704 AGPSO00116 658 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 SURF1Q15526 300 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 PTPROQ16827 1216 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 GSDMBQ8TAX9 411 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 TRIM11Q96F44 468 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 ZNF302Q9NR11 478 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 RBM12Q9NTZ6 932 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 GOLGA8IPA6NC78 632 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 GOLGA8JA6NMD2 632 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 NCK2O43639 380 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 STAM2O75886 525 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 PHKA2P46019 1235 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 ZNF131P52739 623 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 ZBTB16Q05516 673 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 CXCL9Q07325 125 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 TSEN2Q8NCE0 465 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 RAPGEF5Q92565 580 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 TMBIM4Q9HC24 238 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 GINM1Q9NU53 330 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.72□□□□□ -0.531e-6■■□□□ 13.3
COPA-201ENST00000241704 GABBR1Q9UBS5 961 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 ADAMTS1Q9UHI8 967 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 POLIQ9UNA4 740 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 PCDHA10Q9Y5I2 948 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 FTCDO95954 541 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 NQO1P15559 274 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 GRIN1Q05586 938 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 KRT81Q14533 505 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 SWSAP1Q6NVH7 229 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 PTF1AQ7RTS3 328 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 GTF3C2Q8WUA4 911 aaPredicted RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 NAF1Q96HR8 494 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 MSTO1Q9BUK6 570 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 KBTBD13C9JR72 458 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 LMNAP02545 664 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 HHATQ5VTY9 493 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 ALKBH5Q6P6C2 394 aaKnown RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 GBA2Q9HCG7 927 aaPredicted RBP11.72□□□□□ -0.53
COPA-201ENST00000241704 KIAA1586Q9HCI6 787 aa11.72□□□□□ -0.53
COPA-201ENST00000241704 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.53
COPA-201ENST00000241704 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.533e-7■■■■□ 21.7
COPA-201ENST00000241704 BAATQ14032 418 aaPredicted RBP11.71□□□□□ -0.53
COPA-201ENST00000241704 ANKRD40Q6AI12 368 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 PHLDB2Q86SQ0 1253 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms