RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 TCHPQ9BT92 498 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 FTHL17Q9BXU8 183 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 PTPRHQ9HD43 1115 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 EXOC7Q9UPT5 735 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 PIN4Q9Y237 131 aaKnown RBP11.15□□□□□ -0.62
HMGCL-201ENST00000235958 TNFSF13BQ9Y275 285 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 CNTNAP2Q9UHC6 1331 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 ABHD14A-ACY1A0A1B0GW23 586 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 TISP43B9A030 160 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 CLDN3O15551 220 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 TGFB1I1O43294 461 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 TOM1L1O75674 476 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 KIF20AO95235 890 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 PIGRP01833 764 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 PFKMP08237 780 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 MAGEA10P43363 369 aaPredicted RBP11.14□□□□□ -0.63
HMGCL-201ENST00000235958 LIG4P49917 911 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 FAM189BP81408 668 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 COBLL1Q53SF7 1204 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 UBXN11Q5T124 520 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 TWF2Q6IBS0 349 aaKnown RBP11.14□□□□□ -0.63
HMGCL-201ENST00000235958 SLFN12LQ6IEE8 588 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 SLC39A4Q6P5W5 647 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 SASS6Q6UVJ0 657 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 SLC24A5Q71RS6 500 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 OTOP2Q7RTS6 562 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 MLKLQ8NB16 471 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
HMGCL-201ENST00000235958 HAPLN2Q9GZV7 340 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
HMGCL-201ENST00000235958 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 SEMA6BQ9H3T3 888 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 PDZD7Q9H5P4 517 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 RGS18Q9NS28 235 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 TTC3P53804 2025 aa11.14□□□□□ -0.63
HMGCL-201ENST00000235958 TNRC18O15417 2968 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-201ENST00000235958 TANC1Q9C0D5 1861 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 A0A0B4J269 797 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 A0A0U1RQF3 1178 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-201ENST00000235958 C9IYK1 514 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 HNRNPDLO14979 420 aaKnown RBP11.13□□□□□ -0.63
HMGCL-201ENST00000235958 N4BP3O15049 544 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 CLIC2O15247 247 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 ACTN1P12814 892 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 PROZP22891 400 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 ADSSP30520 456 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.632e-8■■■□□ 16.9
HMGCL-201ENST00000235958 STIM1Q13586 685 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 ZSCAN23Q3MJ62 389 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 CENPPQ6IPU0 288 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 SLC27A1Q6PCB7 646 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGCL-201ENST00000235958 LINC01599Q8WXQ3 324 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 DHTKD1Q96HY7 919 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-201ENST00000235958 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 EIF2AQ9BY44 585 aaKnown RBP11.13□□□□□ -0.63
HMGCL-201ENST00000235958 GZF1Q9H116 711 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-201ENST00000235958 PCDHB2Q9Y5E7 798 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 STYXL1Q9Y6J8 313 aa11.13□□□□□ -0.63
HMGCL-201ENST00000235958 UBE4BO95155 1302 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 SYCE3A1L190 88 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 PDXKO00764 312 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 ABLIM1O14639 778 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 ZNF623O75123 536 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 NPTXRO95502 500 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 PPP1R2P41236 205 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
HMGCL-201ENST00000235958 MCL1Q07820 350 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 DPCR1Q3MIW9 517 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 ANKRD40Q6AI12 368 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 KLHL10Q6JEL2 608 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 MPZL3Q6UWV2 235 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 HS2ST1Q7LGA3 356 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 POMGNT1Q8WZA1 660 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 HERVK_113Q902F9 699 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 CCDC51Q96ER9 411 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 GDF15Q99988 308 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 TRIM6Q9C030 488 aaPredicted RBP11.12□□□□□ -0.63
HMGCL-201ENST00000235958 CDT1Q9H211 546 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 C1orf112Q9NSG2 853 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 FAM105AQ9NUU6 356 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 CGNQ9P2M7 1197 aaKnown RBP11.12□□□□□ -0.63
HMGCL-201ENST00000235958 ANKFY1Q9P2R3 1169 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
HMGCL-201ENST00000235958 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 PSMA7O14818 248 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 OGTO15294 1046 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 EFCAB14O75071 495 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 BAIAP3O94812 1187 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 EOMESO95936 686 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 MCF2P10911 925 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 SKIP12755 728 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 IBSPP21815 317 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms