RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SLFN11Q7Z7L1 901 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 CCDC82Q8N4S0 544 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 APPBP2Q92624 585 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 ZDHHC7Q9NXF8 308 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 TIMM22Q9Y584 194 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 PFASO15067 1338 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 CASZ1Q86V15 1759 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 SH3PXD2BA1X283 911 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 FBP2O00757 339 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 GPAA1O43292 621 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 STIP1P31948 543 aaKnown RBP13.9□□□□□ -0.18
MSH2-201ENST00000233146 PPP2R5EQ16537 467 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 PTPROQ16827 1216 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 ZNF568Q3ZCX4 644 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 RBM38Q9H0Z9 239 aaKnown RBP13.9□□□□□ -0.18
MSH2-201ENST00000233146 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 PHTF1Q9UMS5 762 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 ANPEPP15144 967 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 PASD1Q8IV76 773 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 CROCCP3Q8IVE0 287 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.18
MSH2-201ENST00000233146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.9□□□□□ -0.18
MSH2-201ENST00000233146 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 ZFP69BQ9UJL9 534 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 RTCBQ9Y3I0 505 aaKnown RBP13.9□□□□□ -0.18
MSH2-201ENST00000233146 NWD1Q149M9 1564 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 CCDC162PA2VCL2 907 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 ARPC4P59998 168 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 PFKPQ01813 784 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 SYT2Q8N9I0 419 aaPredicted RBP13.9□□□□□ -0.18
MSH2-201ENST00000233146 TPCN2Q8NHX9 752 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 GLG1Q92896 1179 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 PHF20Q9BVI0 1012 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 ADAMTS1Q9UHI8 967 aa13.9□□□□□ -0.18
MSH2-201ENST00000233146 HBS1LQ9Y450 684 aaKnown RBP13.9□□□□□ -0.18
MSH2-201ENST00000233146 SPTLC1O15269 473 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 AP1G1O43747 822 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 FGGP02679 453 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 CCR3P51677 355 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 THOC5Q13769 683 aaKnown RBP13.89□□□□□ -0.19
MSH2-201ENST00000233146 DHX34Q14147 1143 aaKnown RBP13.89□□□□□ -0.19
MSH2-201ENST00000233146 JAMLQ86YT9 394 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 CASP10Q92851 521 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 RUNDC3BQ96NL0 473 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 DISC1Q9NRI5 854 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 CEP72Q9P209 647 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 MTRF1LQ9UGC7 380 aaKnown RBP13.89□□□□□ -0.19
MSH2-201ENST00000233146 ABCB11O95342 1321 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 METP08581 1390 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 FOXO6A8MYZ6 492 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 ZWINTO95229 277 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 PEX26Q7Z412 305 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 CLNKQ7Z7G1 428 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 TNFRSF25Q93038 417 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 ATP6V0A1Q93050 837 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.89□□□□□ -0.19
MSH2-201ENST00000233146 EURLQ9NYK6 297 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 NKIRAS1Q9NYS0 192 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 STX8Q9UNK0 236 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 ADAM23O75077 832 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 OXSR1O95747 527 aaPredicted RBP13.89□□□□□ -0.19
MSH2-201ENST00000233146 SMIM18P0DKX4 95 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 S100A1P23297 94 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
MSH2-201ENST00000233146 RXRGP48443 463 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 PPP1R21Q6ZMI0 780 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 ATG9AQ7Z3C6 839 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 CCDC125Q86Z20 511 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 ITPKCQ96DU7 683 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 PTCD3Q96EY7 689 aaKnown RBP13.89□□□□□ -0.19
MSH2-201ENST00000233146 TRIM11Q96F44 468 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 PRR36Q9H6K5 1346 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 DNAJB4Q9UDY4 337 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 ZNHIT2Q9UHR6 403 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 TSC22D4Q9Y3Q8 395 aa13.89□□□□□ -0.19
MSH2-201ENST00000233146 NOL4O94818 638 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 IL9RQ01113 521 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 MED21Q13503 144 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 FAM83BQ5T0W9 1011 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 C10orf76Q5T2E6 689 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 SYCP2LQ5T4T6 812 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 HES6Q96HZ4 224 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 VPS50Q96JG6 964 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 ZMAT2Q96NC0 199 aaKnown RBP13.88□□□□□ -0.19
MSH2-201ENST00000233146 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
MSH2-201ENST00000233146 OSBPL10Q9BXB5 764 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 KBTBD4Q9NVX7 518 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 LRP6O75581 1613 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 F8W8V4 182 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 ADCY3O60266 1144 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 PGM3O95394 542 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 PCSK6P29122 969 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 LONP1P36776 959 aaKnown RBP13.88□□□□□ -0.19
MSH2-201ENST00000233146 RPL21P46778 160 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms