RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 HECW2Q9P2P5 1572 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ESYT3A0FGR9 886 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 DPYSL4O14531 572 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 IGKV5-2P06315 115 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 NNMTP40261 264 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 FLOT2Q14254 428 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 CEP70Q8NHQ1 597 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 RAPGEF5Q92565 580 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 LRRC37BQ96QE4 947 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 MMP19Q99542 508 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 TSC22D3Q99576 134 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 SLC13A1Q9BZW2 595 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ECT2Q9H8V3 914 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 BARHL2Q9NY43 387 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 SLC9A2Q9UBY0 812 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 MROH7-TTC4A0A0A0MT08 1334 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 RPS6KA4O75676 772 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 TRIM45Q9H8W5 580 aaPredicted RBP12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ADAM21Q9UKJ8 722 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 QRICH2Q9H0J4 1663 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 CPDO75976 1380 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 GMNCA6NCL1 334 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 SNAP23O00161 211 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 AP2B1P63010 937 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 RHOT1Q8IXI2 618 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 SLC44A5Q8NCS7 719 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 SLC26A7Q8TE54 656 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 LXNQ9BS40 222 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ARFIP2P53365 341 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 GPD1LQ8N335 351 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 MTBPQ96DY7 904 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 CD209Q9NNX6 404 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 SYF2O95926 243 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 ATP1A1P05023 1023 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 SMAD1Q15797 465 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 C16orf87Q6PH81 154 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 RNF135Q8IUD6 432 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 NUDCD3Q8IVD9 361 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 SLC4A7Q9Y6M7 1214 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 ZCCHC11Q5TAX3 1644 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 SYNDIG1LA6NDD5 238 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 STK25O00506 426 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 BRAFP15056 766 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 RCAN1P53805 252 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 PSMC5P62195 406 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 PRAMEP78395 509 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 FAM102AQ5T9C2 384 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 CCDC137Q6PK04 289 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 TRIM72Q6ZMU5 477 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 DHX35Q9H5Z1 703 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 NPHP3-ACAD11A0A0J9YXS1 232 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 FAM187AA6NFU0 413 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 BCAR1P56945 870 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 GRAMD4Q6IC98 578 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 ASIC4Q96FT7 647 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 NAF1Q96HR8 494 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 ZNF668Q96K58 619 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 SPATA33Q96N06 139 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 EIF2AK1Q9BQI3 630 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 ASPSCR1Q9BZE9 553 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 DDX47Q9H0S4 455 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 RBAKQ9NYW8 714 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 AFF4Q9UHB7 1163 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 UBA6A0AVT1 1052 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 MOCS2O96007 188 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 MAGEA9P43362 315 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 ACCSLQ4AC99 568 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 ZC3H12BQ5HYM0 836 aaKnown RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 TAS2R42Q7RTR8 314 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-201ENST00000230538 PARVAQ9NVD7 372 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 MAP3K4Q9Y6R4 1608 aa12.25□□□□□ -0.45
LAMA4-201ENST00000230538 GGPS1O95749 300 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 NAA30Q147X3 362 aaPredicted RBP12.24□□□□□ -0.45
LAMA4-201ENST00000230538 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 NDFIP2Q9NV92 336 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 CHCHD3Q9NX63 227 aaKnown RBP12.24□□□□□ -0.45
LAMA4-201ENST00000230538 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
LAMA4-201ENST00000230538 MRFAP1Q9Y605 127 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 RNF103-CHMP3A0A140T963 221 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 A8MXQ7 604 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 DFFAO00273 331 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 ANO4Q32M45 955 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 ENOSF1Q7L5Y1 443 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 ATP11CQ8NB49 1132 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 ABCA8O94911 1581 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 CDC42BPBQ9Y5S2 1711 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 FCER1AP12319 257 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 ZFXP17010 805 aaPredicted RBP12.24□□□□□ -0.45
LAMA4-201ENST00000230538 LRRC14Q15048 493 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 TTC23LQ6PF05 361 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 SHC4Q6S5L8 630 aa12.24□□□□□ -0.45
LAMA4-201ENST00000230538 TADA2BQ86TJ2 420 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms